Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 RN7SKP175-201ENST00000408472 289 ntBASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 BX284668.4-201ENST00000453917 508 ntBASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 AC091804.1-201ENST00000486888 567 ntBASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 AL358472.3-201ENST00000608147 415 ntBASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 AC007663.3-201ENST00000609632 465 ntBASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 AC105917.1-201ENST00000506637 2539 ntBASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SLC38A9Q8NBW4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
SLC38A9Q8NBW4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLC38A9Q8NBW4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLC38A9Q8NBW4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLC38A9Q8NBW4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.21□□□□□ -0.14
SLC38A9Q8NBW4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLC38A9Q8NBW4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLC38A9Q8NBW4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.21□□□□□ -0.14
SLC38A9Q8NBW4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.21□□□□□ -0.14
SLC38A9Q8NBW4 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.21□□□□□ -0.14
SLC38A9Q8NBW4 TMBIM7P-203ENST00000641617 1718 ntBASIC14.21□□□□□ -0.14
SLC38A9Q8NBW4 LILRP1-201ENST00000444199 1370 ntBASIC14.21□□□□□ -0.14
SLC38A9Q8NBW4 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLC38A9Q8NBW4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLC38A9Q8NBW4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
SLC38A9Q8NBW4 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLC38A9Q8NBW4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 AC011840.2-201ENST00000563063 1520 ntBASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 AL354877.1-201ENST00000424412 413 ntBASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 NKAIN1P1-201ENST00000435754 582 ntBASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 HIST2H2BC-201ENST00000498492 580 ntBASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 AC138696.2-201ENST00000607376 223 ntBASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
SLC38A9Q8NBW4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms