Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.11■□□□□ 0.17
RNF135Q8IUD6 CNN2P10-201ENST00000443067 918 ntBASIC16.11■□□□□ 0.17
RNF135Q8IUD6 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 KRT18P43-201ENST00000469825 1281 ntBASIC16.11■□□□□ 0.17
RNF135Q8IUD6 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 RN7SL818P-201ENST00000485099 259 ntBASIC16.11■□□□□ 0.17
RNF135Q8IUD6 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 RN7SL725P-201ENST00000606439 259 ntBASIC16.11■□□□□ 0.17
RNF135Q8IUD6 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 AL354989.2-201ENST00000435838 1540 ntBASIC16.1■□□□□ 0.17
RNF135Q8IUD6 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 AC104784.1-201ENST00000473096 294 ntBASIC16.1■□□□□ 0.17
RNF135Q8IUD6 SERPINA13P-202ENST00000478994 924 ntBASIC16.1■□□□□ 0.17
RNF135Q8IUD6 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 MIR3147-201ENST00000577811 66 ntBASIC16.1■□□□□ 0.17
RNF135Q8IUD6 RN7SL555P-201ENST00000584742 339 ntBASIC16.1■□□□□ 0.17
RNF135Q8IUD6 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 AL133499.1-201ENST00000596207 608 ntBASIC16.1■□□□□ 0.17
RNF135Q8IUD6 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.1■□□□□ 0.17
RNF135Q8IUD6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 AL023775.1-201ENST00000454907 1746 ntBASIC16.09■□□□□ 0.17
RNF135Q8IUD6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF135Q8IUD6 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms