Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.84■□□□□ 0.29
TRIM50Q86XT4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.84■□□□□ 0.29
TRIM50Q86XT4 AC100850.1-201ENST00000506768 649 ntBASIC16.84■□□□□ 0.29
TRIM50Q86XT4 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 AL451050.2-201ENST00000606967 682 ntBASIC16.84■□□□□ 0.29
TRIM50Q86XT4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 FKBP4P6-201ENST00000457486 1332 ntBASIC16.84■□□□□ 0.29
TRIM50Q86XT4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 AC012508.2-201ENST00000567613 1472 ntBASIC16.84■□□□□ 0.29
TRIM50Q86XT4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 AC023024.2-201ENST00000623561 1993 ntBASIC16.84■□□□□ 0.29
TRIM50Q86XT4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 SSR4P1-203ENST00000599569 2260 ntBASIC16.84■□□□□ 0.29
TRIM50Q86XT4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM50Q86XT4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM50Q86XT4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.83■□□□□ 0.29
TRIM50Q86XT4 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 POM121L10P-201ENST00000436994 1285 ntBASIC16.83■□□□□ 0.28
TRIM50Q86XT4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 HIST2H2BC-201ENST00000498492 580 ntBASIC16.83■□□□□ 0.28
TRIM50Q86XT4 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 AC020910.5-201ENST00000623668 1865 ntBASIC16.83■□□□□ 0.28
TRIM50Q86XT4 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM50Q86XT4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM50Q86XT4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms