Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT28Q7Z3Y7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT28Q7Z3Y7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT28Q7Z3Y7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT28Q7Z3Y7 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT28Q7Z3Y7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT28Q7Z3Y7 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KRT28Q7Z3Y7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KRT28Q7Z3Y7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.08■□□□□ 0.81
KRT28Q7Z3Y7 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KRT28Q7Z3Y7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KRT28Q7Z3Y7 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
KRT28Q7Z3Y7 AC090616.6-203ENST00000579186 1945 ntBASIC20.08■□□□□ 0.81
KRT28Q7Z3Y7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.08■□□□□ 0.81
KRT28Q7Z3Y7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KRT28Q7Z3Y7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
KRT28Q7Z3Y7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.08■□□□□ 0.81
KRT28Q7Z3Y7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
KRT28Q7Z3Y7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC20.08■□□□□ 0.81
KRT28Q7Z3Y7 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KRT28Q7Z3Y7 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
KRT28Q7Z3Y7 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC20.08■□□□□ 0.81
KRT28Q7Z3Y7 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC20.08■□□□□ 0.81
KRT28Q7Z3Y7 DUX4L50-201ENST00000455245 715 ntBASIC20.08■□□□□ 0.81
KRT28Q7Z3Y7 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC20.08■□□□□ 0.81
KRT28Q7Z3Y7 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC20.08■□□□□ 0.81
KRT28Q7Z3Y7 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
KRT28Q7Z3Y7 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC20.08■□□□□ 0.81
KRT28Q7Z3Y7 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC20.08■□□□□ 0.81
KRT28Q7Z3Y7 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC20.08■□□□□ 0.81
KRT28Q7Z3Y7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
KRT28Q7Z3Y7 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC20.08■□□□□ 0.8
KRT28Q7Z3Y7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.08■□□□□ 0.8
KRT28Q7Z3Y7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC20.08■□□□□ 0.8
KRT28Q7Z3Y7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
KRT28Q7Z3Y7 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
KRT28Q7Z3Y7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
KRT28Q7Z3Y7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
KRT28Q7Z3Y7 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC20.08■□□□□ 0.8
KRT28Q7Z3Y7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KRT28Q7Z3Y7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KRT28Q7Z3Y7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
KRT28Q7Z3Y7 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC20.07■□□□□ 0.8
KRT28Q7Z3Y7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT28Q7Z3Y7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KRT28Q7Z3Y7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC20.07■□□□□ 0.8
KRT28Q7Z3Y7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
KRT28Q7Z3Y7 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC20.07■□□□□ 0.8
KRT28Q7Z3Y7 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC20.07■□□□□ 0.8
KRT28Q7Z3Y7 AC003686.1-201ENST00000550956 1034 ntBASIC20.07■□□□□ 0.8
KRT28Q7Z3Y7 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC20.07■□□□□ 0.8
KRT28Q7Z3Y7 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
KRT28Q7Z3Y7 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC20.07■□□□□ 0.8
KRT28Q7Z3Y7 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KRT28Q7Z3Y7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.07■□□□□ 0.8
KRT28Q7Z3Y7 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
KRT28Q7Z3Y7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT28Q7Z3Y7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC20.07■□□□□ 0.8
KRT28Q7Z3Y7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC20.07■□□□□ 0.8
KRT28Q7Z3Y7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT28Q7Z3Y7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC20.07■□□□□ 0.8
KRT28Q7Z3Y7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 AHCYP4-201ENST00000419201 1315 ntBASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 OR2R1P-201ENST00000441404 914 ntBASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 AC084752.1-201ENST00000509766 622 ntBASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 NEU3-207ENST00000534628 746 ntTSL 2 BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms