Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 CICP13-201ENST00000422015 2789 ntBASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 AC007274.2-201ENST00000421675 662 ntBASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 AL596276.2-201ENST00000447525 331 ntBASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 AC005740.2-201ENST00000511085 419 ntBASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 AL161670.2-201ENST00000557650 1227 ntBASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 MIR3147-201ENST00000577811 66 ntBASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 RN7SL555P-201ENST00000584742 339 ntBASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 TCAF2P1-201ENST00000291129 2421 ntBASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTC1Q2NKJ3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 CHMP1AP1-201ENST00000445563 662 ntBASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 IQSEC3P1-201ENST00000538799 536 ntBASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 AL023803.2-201ENST00000620080 638 ntBASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 AP001002.3-201ENST00000623482 206 ntBASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTC1Q2NKJ3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms