Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SSRP1Q08945 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSRP1Q08945 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SSRP1Q08945 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SSRP1Q08945 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.57■□□□□ 0.4
SSRP1Q08945 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSRP1Q08945 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SSRP1Q08945 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSRP1Q08945 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSRP1Q08945 AC099063.4-201ENST00000641099 1602 ntBASIC17.57■□□□□ 0.4
SSRP1Q08945 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSRP1Q08945 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSRP1Q08945 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.57■□□□□ 0.4
SSRP1Q08945 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SSRP1Q08945 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SSRP1Q08945 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SSRP1Q08945 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSRP1Q08945 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.56■□□□□ 0.4
SSRP1Q08945 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.56■□□□□ 0.4
SSRP1Q08945 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SSRP1Q08945 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
SSRP1Q08945 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.56■□□□□ 0.4
SSRP1Q08945 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.56■□□□□ 0.4
SSRP1Q08945 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.56■□□□□ 0.4
SSRP1Q08945 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSRP1Q08945 MSTO2P-201ENST00000314835 1709 ntBASIC17.56■□□□□ 0.4
SSRP1Q08945 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSRP1Q08945 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSRP1Q08945 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.56■□□□□ 0.4
SSRP1Q08945 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSRP1Q08945 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.56■□□□□ 0.4
SSRP1Q08945 BAATP1-201ENST00000412284 1225 ntBASIC17.56■□□□□ 0.4
SSRP1Q08945 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.56■□□□□ 0.4
SSRP1Q08945 RN7SL837P-201ENST00000463010 287 ntBASIC17.56■□□□□ 0.4
SSRP1Q08945 RN7SL692P-201ENST00000464677 288 ntBASIC17.56■□□□□ 0.4
SSRP1Q08945 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.56■□□□□ 0.4
SSRP1Q08945 AC026434.2-201ENST00000506094 1078 ntBASIC17.56■□□□□ 0.4
SSRP1Q08945 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.56■□□□□ 0.4
SSRP1Q08945 AP005018.1-201ENST00000525475 301 ntBASIC17.56■□□□□ 0.4
SSRP1Q08945 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.56■□□□□ 0.4
SSRP1Q08945 PTP4A1P2-201ENST00000546033 454 ntBASIC17.56■□□□□ 0.4
SSRP1Q08945 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.56■□□□□ 0.4
SSRP1Q08945 AL603764.1-201ENST00000636452 321 ntBASIC17.56■□□□□ 0.4
SSRP1Q08945 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.56■□□□□ 0.4
SSRP1Q08945 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SSRP1Q08945 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SSRP1Q08945 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SSRP1Q08945 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.56■□□□□ 0.4
SSRP1Q08945 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
SSRP1Q08945 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSRP1Q08945 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSRP1Q08945 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.56■□□□□ 0.4
SSRP1Q08945 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SSRP1Q08945 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.56■□□□□ 0.4
SSRP1Q08945 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SSRP1Q08945 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SSRP1Q08945 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SSRP1Q08945 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSRP1Q08945 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.55■□□□□ 0.4
SSRP1Q08945 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSRP1Q08945 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSRP1Q08945 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.55■□□□□ 0.4
SSRP1Q08945 AL390755.1-201ENST00000623716 2027 ntBASIC17.55■□□□□ 0.4
SSRP1Q08945 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSRP1Q08945 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSRP1Q08945 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SSRP1Q08945 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSRP1Q08945 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.55■□□□□ 0.4
SSRP1Q08945 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
SSRP1Q08945 AC007686.3-201ENST00000619017 3487 ntBASIC17.55■□□□□ 0.4
SSRP1Q08945 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SSRP1Q08945 AC134312.5-201ENST00000568031 1313 ntBASIC17.55■□□□□ 0.4
SSRP1Q08945 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.55■□□□□ 0.4
SSRP1Q08945 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SSRP1Q08945 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.55■□□□□ 0.4
SSRP1Q08945 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SSRP1Q08945 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSRP1Q08945 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.55■□□□□ 0.4
SSRP1Q08945 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
SSRP1Q08945 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.55■□□□□ 0.4
SSRP1Q08945 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.55■□□□□ 0.4
SSRP1Q08945 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.55■□□□□ 0.4
SSRP1Q08945 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.55■□□□□ 0.4
SSRP1Q08945 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SSRP1Q08945 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.55■□□□□ 0.4
SSRP1Q08945 AL596325.1-201ENST00000563991 1082 ntBASIC17.55■□□□□ 0.4
SSRP1Q08945 MIR5189-201ENST00000577370 114 ntBASIC17.55■□□□□ 0.4
SSRP1Q08945 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.55■□□□□ 0.4
SSRP1Q08945 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.55■□□□□ 0.4
SSRP1Q08945 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSRP1Q08945 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSRP1Q08945 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSRP1Q08945 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.55■□□□□ 0.4
SSRP1Q08945 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SSRP1Q08945 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSRP1Q08945 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.55■□□□□ 0.4
SSRP1Q08945 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.55■□□□□ 0.4
SSRP1Q08945 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SSRP1Q08945 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSRP1Q08945 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms