Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDK3Q00526 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDK3Q00526 AC011840.2-201ENST00000563063 1520 ntBASIC14.84□□□□□ -0.03
CDK3Q00526 AC015818.8-201ENST00000587907 1519 ntBASIC14.84□□□□□ -0.03
CDK3Q00526 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDK3Q00526 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDK3Q00526 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDK3Q00526 AL136309.1-201ENST00000403917 691 ntBASIC14.84□□□□□ -0.03
CDK3Q00526 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDK3Q00526 MTX1P1-201ENST00000440904 838 ntBASIC14.84□□□□□ -0.03
CDK3Q00526 AC108725.1-201ENST00000495472 409 ntBASIC14.84□□□□□ -0.03
CDK3Q00526 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CDK3Q00526 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.84□□□□□ -0.03
CDK3Q00526 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CDK3Q00526 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.84□□□□□ -0.03
CDK3Q00526 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.84□□□□□ -0.03
CDK3Q00526 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CDK3Q00526 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDK3Q00526 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.84□□□□□ -0.03
CDK3Q00526 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDK3Q00526 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDK3Q00526 INE2-201ENST00000630399 1874 ntBASIC14.84□□□□□ -0.03
CDK3Q00526 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDK3Q00526 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDK3Q00526 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDK3Q00526 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.84□□□□□ -0.03
CDK3Q00526 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDK3Q00526 AC126177.1-201ENST00000547829 2218 ntBASIC14.84□□□□□ -0.03
CDK3Q00526 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.84□□□□□ -0.03
CDK3Q00526 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
CDK3Q00526 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDK3Q00526 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.03
CDK3Q00526 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CDK3Q00526 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CDK3Q00526 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDK3Q00526 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
CDK3Q00526 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CDK3Q00526 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDK3Q00526 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.83□□□□□ -0.04
CDK3Q00526 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.83□□□□□ -0.04
CDK3Q00526 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CDK3Q00526 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDK3Q00526 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDK3Q00526 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDK3Q00526 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.83□□□□□ -0.04
CDK3Q00526 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CDK3Q00526 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDK3Q00526 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDK3Q00526 RN7SKP175-201ENST00000408472 289 ntBASIC14.83□□□□□ -0.04
CDK3Q00526 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.83□□□□□ -0.04
CDK3Q00526 BTBD6P1-201ENST00000412176 1267 ntBASIC14.83□□□□□ -0.04
CDK3Q00526 AC004945.1-201ENST00000416738 983 ntBASIC14.83□□□□□ -0.04
CDK3Q00526 AC079178.1-201ENST00000420915 656 ntBASIC14.83□□□□□ -0.04
CDK3Q00526 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CDK3Q00526 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.83□□□□□ -0.04
CDK3Q00526 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDK3Q00526 PFN1P12-201ENST00000455938 534 ntBASIC14.83□□□□□ -0.04
CDK3Q00526 RPSAP36-202ENST00000494591 1261 ntBASIC14.83□□□□□ -0.04
CDK3Q00526 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CDK3Q00526 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.83□□□□□ -0.04
CDK3Q00526 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.83□□□□□ -0.04
CDK3Q00526 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
CDK3Q00526 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.83□□□□□ -0.04
CDK3Q00526 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.83□□□□□ -0.04
CDK3Q00526 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.83□□□□□ -0.04
CDK3Q00526 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.83□□□□□ -0.04
CDK3Q00526 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.83□□□□□ -0.04
CDK3Q00526 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.83□□□□□ -0.04
CDK3Q00526 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDK3Q00526 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.83□□□□□ -0.04
CDK3Q00526 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDK3Q00526 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.83□□□□□ -0.04
CDK3Q00526 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.83□□□□□ -0.04
CDK3Q00526 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDK3Q00526 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDK3Q00526 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDK3Q00526 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.83□□□□□ -0.04
CDK3Q00526 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDK3Q00526 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CDK3Q00526 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CDK3Q00526 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDK3Q00526 AC023157.3-201ENST00000619086 2088 ntBASIC14.83□□□□□ -0.04
CDK3Q00526 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
CDK3Q00526 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.83□□□□□ -0.04
CDK3Q00526 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.83□□□□□ -0.04
CDK3Q00526 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.83□□□□□ -0.04
CDK3Q00526 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDK3Q00526 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDK3Q00526 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDK3Q00526 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CDK3Q00526 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDK3Q00526 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CDK3Q00526 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDK3Q00526 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDK3Q00526 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDK3Q00526 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDK3Q00526 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDK3Q00526 RN7SKP230-201ENST00000365642 335 ntBASIC14.82□□□□□ -0.04
CDK3Q00526 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.82□□□□□ -0.04
CDK3Q00526 CHMP1AP1-201ENST00000445563 662 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms