Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 MIR4538-201ENST00000581377 78 ntBASIC15.49■□□□□ 0.07
SLC6A4P31645 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.49■□□□□ 0.07
SLC6A4P31645 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.49■□□□□ 0.07
SLC6A4P31645 MIR6799-201ENST00000620297 69 ntBASIC15.49■□□□□ 0.07
SLC6A4P31645 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
SLC6A4P31645 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A4P31645 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
SLC6A4P31645 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SLC6A4P31645 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC6A4P31645 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.49■□□□□ 0.07
SLC6A4P31645 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A4P31645 AL596257.1-201ENST00000641463 2694 ntBASIC15.49■□□□□ 0.07
SLC6A4P31645 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC6A4P31645 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC6A4P31645 AL023775.1-201ENST00000454907 1746 ntBASIC15.48■□□□□ 0.07
SLC6A4P31645 TCAF2P1-201ENST00000291129 2421 ntBASIC15.48■□□□□ 0.07
SLC6A4P31645 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SLC6A4P31645 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
SLC6A4P31645 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC6A4P31645 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.48■□□□□ 0.07
SLC6A4P31645 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
SLC6A4P31645 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SLC6A4P31645 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 MIR326-201ENST00000362220 95 ntBASIC15.48■□□□□ 0.07
SLC6A4P31645 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SLC6A4P31645 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SLC6A4P31645 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.48■□□□□ 0.07
SLC6A4P31645 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
SLC6A4P31645 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SLC6A4P31645 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC6A4P31645 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC6A4P31645 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.48■□□□□ 0.07
SLC6A4P31645 AC138696.2-201ENST00000607376 223 ntBASIC15.48■□□□□ 0.07
SLC6A4P31645 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 AP000593.2-201ENST00000542775 1433 ntBASIC15.48■□□□□ 0.07
SLC6A4P31645 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.48■□□□□ 0.07
SLC6A4P31645 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.48■□□□□ 0.07
SLC6A4P31645 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SLC6A4P31645 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC6A4P31645 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A4P31645 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC6A4P31645 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A4P31645 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A4P31645 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A4P31645 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC6A4P31645 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A4P31645 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A4P31645 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A4P31645 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A4P31645 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A4P31645 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
SLC6A4P31645 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A4P31645 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.47■□□□□ 0.07
SLC6A4P31645 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A4P31645 BRWD1P1-201ENST00000401091 371 ntBASIC15.47■□□□□ 0.07
SLC6A4P31645 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.47■□□□□ 0.07
SLC6A4P31645 RN7SKP175-201ENST00000408472 289 ntBASIC15.47■□□□□ 0.07
SLC6A4P31645 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC6A4P31645 AC004945.1-201ENST00000416738 983 ntBASIC15.47■□□□□ 0.07
SLC6A4P31645 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.47■□□□□ 0.07
SLC6A4P31645 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC6A4P31645 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.47■□□□□ 0.07
SLC6A4P31645 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
SLC6A4P31645 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.47■□□□□ 0.07
SLC6A4P31645 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.47■□□□□ 0.07
SLC6A4P31645 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.47■□□□□ 0.07
SLC6A4P31645 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.47■□□□□ 0.07
SLC6A4P31645 AC108725.1-201ENST00000495472 409 ntBASIC15.47■□□□□ 0.07
SLC6A4P31645 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.47■□□□□ 0.07
SLC6A4P31645 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SLC6A4P31645 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.47■□□□□ 0.07
SLC6A4P31645 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC6A4P31645 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.47■□□□□ 0.07
SLC6A4P31645 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.47■□□□□ 0.07
SLC6A4P31645 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms