Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.02□□□□□ -0.33
CCL1P22362 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL1P22362 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL1P22362 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.01□□□□□ -0.33
CCL1P22362 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.01□□□□□ -0.33
CCL1P22362 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.01□□□□□ -0.33
CCL1P22362 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL1P22362 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CCL1P22362 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL1P22362 AC006504.5-208ENST00000588784 2401 ntBASIC13.01□□□□□ -0.33
CCL1P22362 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL1P22362 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.01□□□□□ -0.33
CCL1P22362 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCL1P22362 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.01□□□□□ -0.33
CCL1P22362 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
CCL1P22362 RNU1-114P-201ENST00000365297 166 ntBASIC13.01□□□□□ -0.33
CCL1P22362 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CCL1P22362 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL1P22362 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL1P22362 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.01□□□□□ -0.33
CCL1P22362 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.01□□□□□ -0.33
CCL1P22362 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.01□□□□□ -0.33
CCL1P22362 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.01□□□□□ -0.33
CCL1P22362 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.01□□□□□ -0.33
CCL1P22362 AC026434.2-201ENST00000506094 1078 ntBASIC13.01□□□□□ -0.33
CCL1P22362 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.01□□□□□ -0.33
CCL1P22362 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.01□□□□□ -0.33
CCL1P22362 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.01□□□□□ -0.33
CCL1P22362 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.01□□□□□ -0.33
CCL1P22362 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.01□□□□□ -0.33
CCL1P22362 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCL1P22362 SLC7A15P-201ENST00000424028 1363 ntBASIC13.01□□□□□ -0.33
CCL1P22362 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.01□□□□□ -0.33
CCL1P22362 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL1P22362 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CCL1P22362 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL1P22362 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.01□□□□□ -0.33
CCL1P22362 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCL1P22362 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CCL1P22362 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.01□□□□□ -0.33
CCL1P22362 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCL1P22362 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CCL1P22362 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL1P22362 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL1P22362 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
CCL1P22362 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL1P22362 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL1P22362 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.01□□□□□ -0.33
CCL1P22362 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL1P22362 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL1P22362 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL1P22362 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL1P22362 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CCL1P22362 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CCL1P22362 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CCL1P22362 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
CCL1P22362 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13□□□□□ -0.33
CCL1P22362 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCL1P22362 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCL1P22362 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CCL1P22362 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCL1P22362 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13□□□□□ -0.33
CCL1P22362 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCL1P22362 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13□□□□□ -0.33
CCL1P22362 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CCL1P22362 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13□□□□□ -0.33
CCL1P22362 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CCL1P22362 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CCL1P22362 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13□□□□□ -0.33
CCL1P22362 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCL1P22362 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CCL1P22362 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CCL1P22362 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
CCL1P22362 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCL1P22362 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13□□□□□ -0.33
CCL1P22362 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCL1P22362 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CCL1P22362 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13□□□□□ -0.33
CCL1P22362 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCL1P22362 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13□□□□□ -0.33
CCL1P22362 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13□□□□□ -0.33
CCL1P22362 GIMAP3P-201ENST00000495150 836 ntBASIC13□□□□□ -0.33
CCL1P22362 AC104596.2-201ENST00000512793 793 ntBASIC13□□□□□ -0.33
CCL1P22362 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CCL1P22362 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CCL1P22362 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13□□□□□ -0.33
CCL1P22362 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCL1P22362 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13□□□□□ -0.33
CCL1P22362 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13□□□□□ -0.33
CCL1P22362 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13□□□□□ -0.33
CCL1P22362 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13□□□□□ -0.33
CCL1P22362 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13□□□□□ -0.33
CCL1P22362 AC093726.1-201ENST00000608064 963 ntBASIC13□□□□□ -0.33
CCL1P22362 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13□□□□□ -0.33
CCL1P22362 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCL1P22362 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13□□□□□ -0.33
CCL1P22362 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13□□□□□ -0.33
CCL1P22362 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
CCL1P22362 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
CCL1P22362 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms