Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PHOX2BQ99453 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHOX2BQ99453 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHOX2BQ99453 AL691432.1-201ENST00000596308 1422 ntBASIC15.4■□□□□ 0.06
PHOX2BQ99453 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PHOX2BQ99453 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PHOX2BQ99453 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.4■□□□□ 0.06
PHOX2BQ99453 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHOX2BQ99453 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHOX2BQ99453 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHOX2BQ99453 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PHOX2BQ99453 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PHOX2BQ99453 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHOX2BQ99453 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHOX2BQ99453 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHOX2BQ99453 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PHOX2BQ99453 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHOX2BQ99453 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHOX2BQ99453 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PHOX2BQ99453 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHOX2BQ99453 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHOX2BQ99453 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PHOX2BQ99453 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHOX2BQ99453 CCDC152-202ENST00000388827 1237 ntTSL 2 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 ISCA2P1-201ENST00000425548 448 ntBASIC15.39■□□□□ 0.05
PHOX2BQ99453 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 AC007041.1-201ENST00000438989 1155 ntBASIC15.39■□□□□ 0.05
PHOX2BQ99453 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 AC027139.1-201ENST00000565286 951 ntBASIC15.39■□□□□ 0.05
PHOX2BQ99453 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHOX2BQ99453 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 AC138894.2-201ENST00000602838 371 ntBASIC15.39■□□□□ 0.05
PHOX2BQ99453 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 AC009118.3-201ENST00000622896 873 ntBASIC15.39■□□□□ 0.05
PHOX2BQ99453 AC051619.9-201ENST00000623237 597 ntBASIC15.39■□□□□ 0.05
PHOX2BQ99453 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHOX2BQ99453 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 TBC1D3J-201ENST00000620719 1426 ntBASIC15.39■□□□□ 0.05
PHOX2BQ99453 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHOX2BQ99453 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHOX2BQ99453 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHOX2BQ99453 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHOX2BQ99453 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHOX2BQ99453 TUBB8P12-201ENST00000308911 1335 ntBASIC15.39■□□□□ 0.05
PHOX2BQ99453 TUBB7P-202ENST00000428444 1305 ntBASIC15.39■□□□□ 0.05
PHOX2BQ99453 TUBB8P7-204ENST00000567960 1332 ntBASIC15.39■□□□□ 0.05
PHOX2BQ99453 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHOX2BQ99453 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHOX2BQ99453 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHOX2BQ99453 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PHOX2BQ99453 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PHOX2BQ99453 AC104640.1-201ENST00000562617 2109 ntBASIC15.38■□□□□ 0.05
PHOX2BQ99453 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PHOX2BQ99453 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.38■□□□□ 0.05
PHOX2BQ99453 AL121723.1-201ENST00000445194 1519 ntBASIC15.38■□□□□ 0.05
PHOX2BQ99453 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC15.38■□□□□ 0.05
PHOX2BQ99453 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.38■□□□□ 0.05
PHOX2BQ99453 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PHOX2BQ99453 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PHOX2BQ99453 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.38■□□□□ 0.05
PHOX2BQ99453 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PHOX2BQ99453 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.38■□□□□ 0.05
PHOX2BQ99453 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.38■□□□□ 0.05
PHOX2BQ99453 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PHOX2BQ99453 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.38■□□□□ 0.05
PHOX2BQ99453 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PHOX2BQ99453 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
PHOX2BQ99453 AL357373.1-201ENST00000394974 322 ntBASIC15.38■□□□□ 0.05
PHOX2BQ99453 AC004987.2-201ENST00000395959 1148 ntBASIC15.38■□□□□ 0.05
PHOX2BQ99453 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PHOX2BQ99453 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.38■□□□□ 0.05
PHOX2BQ99453 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC15.38■□□□□ 0.05
PHOX2BQ99453 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms