Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.33■□□□□ 0.36
HMGCS2P54868 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.33■□□□□ 0.36
HMGCS2P54868 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC17.33■□□□□ 0.36
HMGCS2P54868 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
HMGCS2P54868 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.33■□□□□ 0.36
HMGCS2P54868 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.33■□□□□ 0.36
HMGCS2P54868 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
HMGCS2P54868 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.33■□□□□ 0.36
HMGCS2P54868 Z98259.2-201ENST00000641583 609 ntBASIC17.33■□□□□ 0.36
HMGCS2P54868 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCS2P54868 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
HMGCS2P54868 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCS2P54868 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCS2P54868 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
HMGCS2P54868 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCS2P54868 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
HMGCS2P54868 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
HMGCS2P54868 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCS2P54868 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGCS2P54868 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS2P54868 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HMGCS2P54868 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.32■□□□□ 0.36
HMGCS2P54868 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.32■□□□□ 0.36
HMGCS2P54868 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS2P54868 AC003102.2-201ENST00000589195 1469 ntBASIC17.32■□□□□ 0.36
HMGCS2P54868 AP000845.1-201ENST00000581677 2131 ntBASIC17.32■□□□□ 0.36
HMGCS2P54868 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.32■□□□□ 0.36
HMGCS2P54868 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS2P54868 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS2P54868 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGCS2P54868 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC17.32■□□□□ 0.36
HMGCS2P54868 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS2P54868 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS2P54868 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS2P54868 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS2P54868 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS2P54868 IGF1-203ENST00000392904 761 ntTSL 5 BASIC17.32■□□□□ 0.36
HMGCS2P54868 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.32■□□□□ 0.36
HMGCS2P54868 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGCS2P54868 AC242376.1-201ENST00000559033 726 ntBASIC17.32■□□□□ 0.36
HMGCS2P54868 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS2P54868 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS2P54868 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.32■□□□□ 0.36
HMGCS2P54868 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
HMGCS2P54868 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HMGCS2P54868 AC018635.2-201ENST00000608625 364 ntBASIC17.32■□□□□ 0.36
HMGCS2P54868 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS2P54868 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS2P54868 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS2P54868 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.32■□□□□ 0.36
HMGCS2P54868 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.32■□□□□ 0.36
HMGCS2P54868 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS2P54868 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMGCS2P54868 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.32■□□□□ 0.36
HMGCS2P54868 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGCS2P54868 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCS2P54868 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCS2P54868 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.31■□□□□ 0.36
HMGCS2P54868 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
HMGCS2P54868 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCS2P54868 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.31■□□□□ 0.36
HMGCS2P54868 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCS2P54868 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCS2P54868 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCS2P54868 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.31■□□□□ 0.36
HMGCS2P54868 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.31■□□□□ 0.36
HMGCS2P54868 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HMGCS2P54868 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCS2P54868 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCS2P54868 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCS2P54868 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCS2P54868 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HMGCS2P54868 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCS2P54868 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.31■□□□□ 0.36
HMGCS2P54868 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.31■□□□□ 0.36
HMGCS2P54868 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.31■□□□□ 0.36
HMGCS2P54868 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.31■□□□□ 0.36
HMGCS2P54868 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC17.31■□□□□ 0.36
HMGCS2P54868 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.31■□□□□ 0.36
HMGCS2P54868 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
HMGCS2P54868 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.31■□□□□ 0.36
HMGCS2P54868 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HMGCS2P54868 MIR3147-201ENST00000577811 66 ntBASIC17.31■□□□□ 0.36
HMGCS2P54868 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.31■□□□□ 0.36
HMGCS2P54868 MIR6720-201ENST00000611664 98 ntBASIC17.31■□□□□ 0.36
HMGCS2P54868 AC006453.1-201ENST00000636037 1257 ntBASIC17.31■□□□□ 0.36
HMGCS2P54868 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCS2P54868 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.31■□□□□ 0.36
HMGCS2P54868 AL365203.3-201ENST00000609742 2057 ntBASIC17.31■□□□□ 0.36
HMGCS2P54868 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HMGCS2P54868 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCS2P54868 AC026691.1-201ENST00000602502 2017 ntBASIC17.31■□□□□ 0.36
HMGCS2P54868 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.31■□□□□ 0.36
HMGCS2P54868 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCS2P54868 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGCS2P54868 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCS2P54868 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMGCS2P54868 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.3■□□□□ 0.36
HMGCS2P54868 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.3■□□□□ 0.36
HMGCS2P54868 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms