Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RFC3P40938 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.95□□□□□ -0.18
RFC3P40938 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFC3P40938 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFC3P40938 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFC3P40938 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFC3P40938 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFC3P40938 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFC3P40938 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFC3P40938 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFC3P40938 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.94□□□□□ -0.18
RFC3P40938 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFC3P40938 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFC3P40938 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFC3P40938 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFC3P40938 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFC3P40938 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFC3P40938 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFC3P40938 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.94□□□□□ -0.18
RFC3P40938 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.94□□□□□ -0.18
RFC3P40938 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.94□□□□□ -0.18
RFC3P40938 MIR1202-201ENST00000408529 83 ntBASIC13.94□□□□□ -0.18
RFC3P40938 CNN2P8-201ENST00000421872 913 ntBASIC13.94□□□□□ -0.18
RFC3P40938 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFC3P40938 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.94□□□□□ -0.18
RFC3P40938 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
RFC3P40938 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.94□□□□□ -0.18
RFC3P40938 RPL13AP20-201ENST00000459725 609 ntBASIC13.94□□□□□ -0.18
RFC3P40938 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.94□□□□□ -0.18
RFC3P40938 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.94□□□□□ -0.18
RFC3P40938 AC004066.1-201ENST00000502488 802 ntBASIC13.94□□□□□ -0.18
RFC3P40938 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFC3P40938 RNA5SP412-201ENST00000516234 123 ntBASIC13.94□□□□□ -0.18
RFC3P40938 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.94□□□□□ -0.18
RFC3P40938 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.94□□□□□ -0.18
RFC3P40938 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFC3P40938 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.94□□□□□ -0.18
RFC3P40938 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.94□□□□□ -0.18
RFC3P40938 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.94□□□□□ -0.18
RFC3P40938 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.94□□□□□ -0.18
RFC3P40938 MIR4525-201ENST00000580000 75 ntBASIC13.94□□□□□ -0.18
RFC3P40938 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFC3P40938 AL359258.3-201ENST00000622910 2331 ntBASIC13.94□□□□□ -0.18
RFC3P40938 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.94□□□□□ -0.18
RFC3P40938 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.94□□□□□ -0.18
RFC3P40938 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.94□□□□□ -0.18
RFC3P40938 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RFC3P40938 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RFC3P40938 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFC3P40938 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.94□□□□□ -0.18
RFC3P40938 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFC3P40938 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFC3P40938 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFC3P40938 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFC3P40938 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RFC3P40938 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
RFC3P40938 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFC3P40938 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFC3P40938 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RFC3P40938 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.93□□□□□ -0.18
RFC3P40938 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RFC3P40938 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.93□□□□□ -0.18
RFC3P40938 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RFC3P40938 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFC3P40938 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RFC3P40938 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.93□□□□□ -0.18
RFC3P40938 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.93□□□□□ -0.18
RFC3P40938 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFC3P40938 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.93□□□□□ -0.18
RFC3P40938 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
RFC3P40938 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.93□□□□□ -0.18
RFC3P40938 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFC3P40938 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RFC3P40938 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFC3P40938 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFC3P40938 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
RFC3P40938 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFC3P40938 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFC3P40938 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFC3P40938 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
RFC3P40938 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFC3P40938 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFC3P40938 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.93□□□□□ -0.18
RFC3P40938 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFC3P40938 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RFC3P40938 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFC3P40938 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RFC3P40938 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.93□□□□□ -0.18
RFC3P40938 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFC3P40938 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.93□□□□□ -0.18
RFC3P40938 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.93□□□□□ -0.18
RFC3P40938 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.93□□□□□ -0.18
RFC3P40938 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.93□□□□□ -0.18
RFC3P40938 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.93□□□□□ -0.18
RFC3P40938 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFC3P40938 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.93□□□□□ -0.18
RFC3P40938 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.93□□□□□ -0.18
RFC3P40938 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.93□□□□□ -0.18
RFC3P40938 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.93□□□□□ -0.18
RFC3P40938 MIR4741-201ENST00000579822 90 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms