Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
TNFSF4P23510 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.03□□□□□ -0.32
TNFSF4P23510 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.03□□□□□ -0.32
TNFSF4P23510 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.03□□□□□ -0.32
TNFSF4P23510 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.03□□□□□ -0.32
TNFSF4P23510 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TNFSF4P23510 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TNFSF4P23510 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TNFSF4P23510 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 AC022532.1-201ENST00000624563 1728 ntBASIC13.03□□□□□ -0.32
TNFSF4P23510 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.03□□□□□ -0.32
TNFSF4P23510 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
TNFSF4P23510 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.03□□□□□ -0.32
TNFSF4P23510 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
TNFSF4P23510 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.03□□□□□ -0.32
TNFSF4P23510 AC068587.3-201ENST00000526613 355 ntBASIC13.03□□□□□ -0.32
TNFSF4P23510 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.03□□□□□ -0.32
TNFSF4P23510 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.03□□□□□ -0.32
TNFSF4P23510 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.03□□□□□ -0.32
TNFSF4P23510 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.03□□□□□ -0.32
TNFSF4P23510 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.03□□□□□ -0.32
TNFSF4P23510 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.03□□□□□ -0.32
TNFSF4P23510 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.03□□□□□ -0.32
TNFSF4P23510 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.03□□□□□ -0.32
TNFSF4P23510 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 WASH3P-207ENST00000560956 1394 ntBASIC13.03□□□□□ -0.32
TNFSF4P23510 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.03□□□□□ -0.32
TNFSF4P23510 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 LRRC59-203ENST00000576448 1531 ntBASIC13.03□□□□□ -0.32
TNFSF4P23510 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
TNFSF4P23510 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.02□□□□□ -0.32
TNFSF4P23510 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.32
TNFSF4P23510 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TNFSF4P23510 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
TNFSF4P23510 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TNFSF4P23510 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TNFSF4P23510 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TNFSF4P23510 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
TNFSF4P23510 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TNFSF4P23510 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TNFSF4P23510 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TNFSF4P23510 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
TNFSF4P23510 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.02□□□□□ -0.32
TNFSF4P23510 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TNFSF4P23510 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TNFSF4P23510 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TNFSF4P23510 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TNFSF4P23510 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.02□□□□□ -0.33
TNFSF4P23510 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TNFSF4P23510 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
TNFSF4P23510 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TNFSF4P23510 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TNFSF4P23510 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TNFSF4P23510 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
TNFSF4P23510 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
TNFSF4P23510 BAATP1-201ENST00000412284 1225 ntBASIC13.02□□□□□ -0.33
TNFSF4P23510 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.02□□□□□ -0.33
TNFSF4P23510 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.02□□□□□ -0.33
TNFSF4P23510 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.02□□□□□ -0.33
TNFSF4P23510 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.02□□□□□ -0.33
TNFSF4P23510 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.02□□□□□ -0.33
TNFSF4P23510 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TNFSF4P23510 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.02□□□□□ -0.33
TNFSF4P23510 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.02□□□□□ -0.33
TNFSF4P23510 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.02□□□□□ -0.33
TNFSF4P23510 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.02□□□□□ -0.33
TNFSF4P23510 MIR5189-201ENST00000577370 114 ntBASIC13.02□□□□□ -0.33
TNFSF4P23510 AC132938.2-201ENST00000579188 680 ntBASIC13.02□□□□□ -0.33
TNFSF4P23510 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.02□□□□□ -0.33
TNFSF4P23510 AL022328.1-201ENST00000610050 478 ntBASIC13.02□□□□□ -0.33
TNFSF4P23510 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TNFSF4P23510 AC005252.2-201ENST00000624630 1141 ntBASIC13.02□□□□□ -0.33
TNFSF4P23510 AL591163.1-201ENST00000641757 987 ntBASIC13.02□□□□□ -0.33
TNFSF4P23510 AC093525.8-201ENST00000624099 1342 ntBASIC13.02□□□□□ -0.33
TNFSF4P23510 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TNFSF4P23510 KRT8P44-201ENST00000441609 1350 ntBASIC13.02□□□□□ -0.33
TNFSF4P23510 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms