Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL3L1P16619 LRRC59-203ENST00000576448 1531 ntBASIC12.54□□□□□ -0.4
CCL3L1P16619 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CCL3L1P16619 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL3L1P16619 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL3L1P16619 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.54□□□□□ -0.4
CCL3L1P16619 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL3L1P16619 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL3L1P16619 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CCL3L1P16619 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL3L1P16619 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CCL3L1P16619 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CCL3L1P16619 BAATP1-201ENST00000412284 1225 ntBASIC12.54□□□□□ -0.4
CCL3L1P16619 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.54□□□□□ -0.4
CCL3L1P16619 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.54□□□□□ -0.4
CCL3L1P16619 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.54□□□□□ -0.4
CCL3L1P16619 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.54□□□□□ -0.4
CCL3L1P16619 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL3L1P16619 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.54□□□□□ -0.4
CCL3L1P16619 AC114812.1-204ENST00000449669 728 ntBASIC12.54□□□□□ -0.4
CCL3L1P16619 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL3L1P16619 AC022137.2-201ENST00000503482 481 ntBASIC12.54□□□□□ -0.4
CCL3L1P16619 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CCL3L1P16619 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.54□□□□□ -0.4
CCL3L1P16619 AC068587.3-201ENST00000526613 355 ntBASIC12.54□□□□□ -0.4
CCL3L1P16619 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CCL3L1P16619 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.54□□□□□ -0.4
CCL3L1P16619 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CCL3L1P16619 RBM7-207ENST00000544582 692 ntTSL 3 BASIC12.54□□□□□ -0.4
CCL3L1P16619 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.54□□□□□ -0.4
CCL3L1P16619 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.54□□□□□ -0.4
CCL3L1P16619 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.54□□□□□ -0.4
CCL3L1P16619 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.54□□□□□ -0.4
CCL3L1P16619 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.54□□□□□ -0.4
CCL3L1P16619 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.54□□□□□ -0.4
CCL3L1P16619 PRSS30P-206ENST00000641773 873 ntBASIC12.54□□□□□ -0.4
CCL3L1P16619 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL3L1P16619 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL3L1P16619 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CCL3L1P16619 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL3L1P16619 AC097376.2-205ENST00000610159 5334 ntBASIC12.54□□□□□ -0.4
CCL3L1P16619 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL3L1P16619 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
CCL3L1P16619 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.54□□□□□ -0.4
CCL3L1P16619 AJ011931.1-201ENST00000618749 2492 ntBASIC12.54□□□□□ -0.4
CCL3L1P16619 KRT8P35-201ENST00000483942 1338 ntBASIC12.54□□□□□ -0.4
CCL3L1P16619 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CCL3L1P16619 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL3L1P16619 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL3L1P16619 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CCL3L1P16619 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.54□□□□□ -0.4
CCL3L1P16619 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.54□□□□□ -0.4
CCL3L1P16619 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL3L1P16619 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL3L1P16619 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL3L1P16619 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC12.54□□□□□ -0.4
CCL3L1P16619 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCL3L1P16619 KRT8P14-201ENST00000414254 1442 ntBASIC12.54□□□□□ -0.4
CCL3L1P16619 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.53□□□□□ -0.4
CCL3L1P16619 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CCL3L1P16619 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 OR2I1P-209ENST00000641730 5365 ntBASIC12.53□□□□□ -0.4
CCL3L1P16619 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CCL3L1P16619 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CCL3L1P16619 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.53□□□□□ -0.4
CCL3L1P16619 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.53□□□□□ -0.4
CCL3L1P16619 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.53□□□□□ -0.4
CCL3L1P16619 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CCL3L1P16619 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CCL3L1P16619 ACKR1-201ENST00000368121 1240 ntBASIC12.53□□□□□ -0.4
CCL3L1P16619 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CCL3L1P16619 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC12.53□□□□□ -0.4
CCL3L1P16619 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.53□□□□□ -0.4
CCL3L1P16619 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.53□□□□□ -0.4
CCL3L1P16619 AC005034.1-201ENST00000426657 489 ntBASIC12.53□□□□□ -0.4
CCL3L1P16619 AC012441.1-201ENST00000446669 685 ntBASIC12.53□□□□□ -0.4
CCL3L1P16619 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.53□□□□□ -0.4
CCL3L1P16619 GIMAP3P-201ENST00000495150 836 ntBASIC12.53□□□□□ -0.4
CCL3L1P16619 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.53□□□□□ -0.4
CCL3L1P16619 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.53□□□□□ -0.4
CCL3L1P16619 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.53□□□□□ -0.4
CCL3L1P16619 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms