Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
APOEP02649 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
APOEP02649 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
APOEP02649 ACKR1-201ENST00000368121 1240 ntBASIC15.94■□□□□ 0.14
APOEP02649 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
APOEP02649 AL645937.2-201ENST00000396808 931 ntBASIC15.94■□□□□ 0.14
APOEP02649 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
APOEP02649 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.94■□□□□ 0.14
APOEP02649 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.94■□□□□ 0.14
APOEP02649 AC093433.1-201ENST00000458048 571 ntBASIC15.94■□□□□ 0.14
APOEP02649 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
APOEP02649 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.94■□□□□ 0.14
APOEP02649 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.94■□□□□ 0.14
APOEP02649 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
APOEP02649 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.94■□□□□ 0.14
APOEP02649 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
APOEP02649 AC008735.3-201ENST00000596646 500 ntBASIC15.94■□□□□ 0.14
APOEP02649 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.94■□□□□ 0.14
APOEP02649 AP005019.2-201ENST00000615104 511 ntBASIC15.94■□□□□ 0.14
APOEP02649 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.94■□□□□ 0.14
APOEP02649 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
APOEP02649 AC007787.1-201ENST00000588095 1583 ntBASIC15.94■□□□□ 0.14
APOEP02649 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
APOEP02649 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.94■□□□□ 0.14
APOEP02649 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
APOEP02649 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
APOEP02649 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
APOEP02649 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.94■□□□□ 0.14
APOEP02649 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
APOEP02649 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
APOEP02649 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
APOEP02649 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.94■□□□□ 0.14
APOEP02649 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
APOEP02649 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.94■□□□□ 0.14
APOEP02649 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
APOEP02649 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
APOEP02649 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
APOEP02649 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
APOEP02649 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
APOEP02649 AC023024.2-201ENST00000623561 1993 ntBASIC15.93■□□□□ 0.14
APOEP02649 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
APOEP02649 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.93■□□□□ 0.14
APOEP02649 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
APOEP02649 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.93■□□□□ 0.14
APOEP02649 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
APOEP02649 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
APOEP02649 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
APOEP02649 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
APOEP02649 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
APOEP02649 TMEM14DP-201ENST00000422205 345 ntBASIC15.93■□□□□ 0.14
APOEP02649 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
APOEP02649 AL355864.2-201ENST00000447420 863 ntBASIC15.93■□□□□ 0.14
APOEP02649 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
APOEP02649 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.93■□□□□ 0.14
APOEP02649 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
APOEP02649 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.93■□□□□ 0.14
APOEP02649 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
APOEP02649 RPSAP52-203ENST00000622976 1023 ntBASIC15.93■□□□□ 0.14
APOEP02649 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.93■□□□□ 0.14
APOEP02649 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
APOEP02649 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
APOEP02649 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
APOEP02649 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
APOEP02649 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
APOEP02649 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
APOEP02649 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
APOEP02649 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
APOEP02649 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
APOEP02649 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
APOEP02649 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
APOEP02649 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
APOEP02649 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
APOEP02649 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
APOEP02649 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
APOEP02649 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.92■□□□□ 0.14
APOEP02649 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.92■□□□□ 0.14
APOEP02649 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.92■□□□□ 0.14
APOEP02649 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
APOEP02649 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
APOEP02649 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
APOEP02649 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
APOEP02649 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
APOEP02649 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
APOEP02649 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
APOEP02649 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
APOEP02649 CICP23-201ENST00000605013 2741 ntBASIC15.92■□□□□ 0.14
APOEP02649 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
APOEP02649 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
APOEP02649 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
APOEP02649 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
APOEP02649 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
APOEP02649 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
APOEP02649 AC106881.1-201ENST00000605849 3329 ntBASIC15.92■□□□□ 0.14
APOEP02649 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
APOEP02649 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
APOEP02649 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
APOEP02649 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
APOEP02649 BAATP1-201ENST00000412284 1225 ntBASIC15.92■□□□□ 0.14
APOEP02649 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.92■□□□□ 0.14
APOEP02649 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms