Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 CICP14-201ENST00000629111 2732 ntBASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 HILS1-202ENST00000545329 423 ntBASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 INTS4P1-203ENST00000641008 3683 ntBASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 BTBD7P1-201ENST00000447253 1453 ntBASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 CU639417.3-201ENST00000624240 1404 ntBASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 DFFBP1-201ENST00000433250 979 ntBASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 MIR4313-201ENST00000580760 101 ntBASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 CTBP2P3-201ENST00000585629 1255 ntBASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 CYP4F24P-201ENST00000586049 1580 ntBASIC18.34■□□□□ 0.53
DDX49Q9Y6V7 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.53
DDX49Q9Y6V7 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
DDX49Q9Y6V7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
DDX49Q9Y6V7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.33■□□□□ 0.53
DDX49Q9Y6V7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
DDX49Q9Y6V7 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
DDX49Q9Y6V7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
DDX49Q9Y6V7 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DDX49Q9Y6V7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
DDX49Q9Y6V7 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC18.33■□□□□ 0.53
DDX49Q9Y6V7 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
DDX49Q9Y6V7 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC18.33■□□□□ 0.53
DDX49Q9Y6V7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
DDX49Q9Y6V7 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
DDX49Q9Y6V7 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DDX49Q9Y6V7 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
DDX49Q9Y6V7 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
DDX49Q9Y6V7 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
DDX49Q9Y6V7 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DDX49Q9Y6V7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
DDX49Q9Y6V7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
DDX49Q9Y6V7 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
DDX49Q9Y6V7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.33■□□□□ 0.52
DDX49Q9Y6V7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
DDX49Q9Y6V7 KRT17P7-201ENST00000451704 1104 ntBASIC18.33■□□□□ 0.52
DDX49Q9Y6V7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.33■□□□□ 0.52
DDX49Q9Y6V7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.33■□□□□ 0.52
DDX49Q9Y6V7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DDX49Q9Y6V7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
DDX49Q9Y6V7 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
DDX49Q9Y6V7 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX49Q9Y6V7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.33■□□□□ 0.52
DDX49Q9Y6V7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms