Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.12■□□□□ 0.17
ARHGEF3Q9NR81 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF3Q9NR81 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
ARHGEF3Q9NR81 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.12■□□□□ 0.17
ARHGEF3Q9NR81 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.12■□□□□ 0.17
ARHGEF3Q9NR81 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.12■□□□□ 0.17
ARHGEF3Q9NR81 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF3Q9NR81 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ARHGEF3Q9NR81 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.12■□□□□ 0.17
ARHGEF3Q9NR81 AC244452.3-201ENST00000636814 210 ntBASIC16.12■□□□□ 0.17
ARHGEF3Q9NR81 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.12■□□□□ 0.17
ARHGEF3Q9NR81 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ARHGEF3Q9NR81 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF3Q9NR81 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.12■□□□□ 0.17
ARHGEF3Q9NR81 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.12■□□□□ 0.17
ARHGEF3Q9NR81 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.12■□□□□ 0.17
ARHGEF3Q9NR81 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.12■□□□□ 0.17
ARHGEF3Q9NR81 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF3Q9NR81 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF3Q9NR81 BNIP3P1-202ENST00000550043 1585 ntBASIC16.12■□□□□ 0.17
ARHGEF3Q9NR81 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF3Q9NR81 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF3Q9NR81 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
ARHGEF3Q9NR81 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF3Q9NR81 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF3Q9NR81 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF3Q9NR81 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF3Q9NR81 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 LINC00552-201ENST00000625151 2579 ntBASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 AL008638.5-201ENST00000623814 1298 ntBASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF3Q9NR81 AC232323.1-201ENST00000540724 2099 ntBASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 REXO1L5P-201ENST00000622260 2098 ntBASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 ACKR1-201ENST00000368121 1240 ntBASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 BTBD6P1-201ENST00000412176 1267 ntBASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 AC007969.1-201ENST00000433675 447 ntBASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 POU5F1P6-201ENST00000466990 990 ntBASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 AC025279.2-201ENST00000569730 653 ntBASIC16.1■□□□□ 0.17
ARHGEF3Q9NR81 AL390755.1-201ENST00000623716 2027 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms