Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC152010.1-201ENST00000415779 2006 ntBASIC18.73■□□□□ 0.59
UPF2Q9HAU5 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 AL359881.3-201ENST00000602640 1721 ntBASIC18.72■□□□□ 0.59
UPF2Q9HAU5 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 ACTG1P14-201ENST00000446382 1122 ntBASIC18.72■□□□□ 0.59
UPF2Q9HAU5 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 AC069335.1-201ENST00000489972 472 ntBASIC18.72■□□□□ 0.59
UPF2Q9HAU5 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.72■□□□□ 0.59
UPF2Q9HAU5 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
UPF2Q9HAU5 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 FAM197Y3-203ENST00000618346 717 ntBASIC18.71■□□□□ 0.59
UPF2Q9HAU5 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPF2Q9HAU5 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
UPF2Q9HAU5 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPF2Q9HAU5 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms