Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Gm11660-201ENSMUST00000120955 412 ntBASIC12.19□□□□□ -0.46
Lsm7Q9CQQ8 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.19□□□□□ -0.46
Lsm7Q9CQQ8 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.19□□□□□ -0.46
Lsm7Q9CQQ8 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Lsm7Q9CQQ8 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm7Q9CQQ8 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.19□□□□□ -0.46
Lsm7Q9CQQ8 Spcs1-203ENSMUST00000226374 592 ntBASIC12.19□□□□□ -0.46
Lsm7Q9CQQ8 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.19□□□□□ -0.46
Lsm7Q9CQQ8 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm7Q9CQQ8 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm7Q9CQQ8 Gm5705-201ENSMUST00000066241 711 ntBASIC12.19□□□□□ -0.46
Lsm7Q9CQQ8 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm7Q9CQQ8 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm7Q9CQQ8 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm7Q9CQQ8 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm7Q9CQQ8 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm7Q9CQQ8 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Lsm7Q9CQQ8 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm7Q9CQQ8 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm7Q9CQQ8 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Lsm7Q9CQQ8 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm7Q9CQQ8 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm7Q9CQQ8 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm7Q9CQQ8 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Lsm7Q9CQQ8 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Gm24891-201ENSMUST00000104391 136 ntBASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Gm9062-201ENSMUST00000117712 727 ntBASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Gm15515-201ENSMUST00000117827 822 ntBASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Gm23085-201ENSMUST00000157849 293 ntBASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Gm42997-202ENSMUST00000200321 985 ntBASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Lsm7Q9CQQ8 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Gm12857-201ENSMUST00000117678 592 ntBASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Gm44124-201ENSMUST00000204159 472 ntBASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Gm6905-201ENSMUST00000205729 511 ntBASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm7Q9CQQ8 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 102.6 ms