Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 CELP-201ENST00000411440 1249 ntTSL 5 BASIC14.97□□□□□ -0.01
TTC28Q96AY4 POLR2LP1-206ENST00000444785 187 ntBASIC14.97□□□□□ -0.01
TTC28Q96AY4 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC14.97□□□□□ -0.01
TTC28Q96AY4 AC008021.1-201ENST00000474180 414 ntBASIC14.97□□□□□ -0.01
TTC28Q96AY4 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC14.97□□□□□ -0.01
TTC28Q96AY4 CAP2-207ENST00000493172 861 ntTSL 2 BASIC14.97□□□□□ -0.01
TTC28Q96AY4 BMF-206ENST00000558774 671 ntTSL 3 BASIC14.97□□□□□ -0.01
TTC28Q96AY4 AC005746.3-201ENST00000614751 393 ntBASIC14.97□□□□□ -0.01
TTC28Q96AY4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.96□□□□□ -0.01
TTC28Q96AY4 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.96□□□□□ -0.01
TTC28Q96AY4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC28Q96AY4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TTC28Q96AY4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TTC28Q96AY4 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.96□□□□□ -0.01
TTC28Q96AY4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC28Q96AY4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC28Q96AY4 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC28Q96AY4 NRADDP-201ENST00000437305 691 ntBASIC14.96□□□□□ -0.01
TTC28Q96AY4 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.96□□□□□ -0.01
TTC28Q96AY4 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC28Q96AY4 RN7SL340P-201ENST00000470792 296 ntBASIC14.96□□□□□ -0.01
TTC28Q96AY4 AC008494.1-201ENST00000497612 796 ntBASIC14.96□□□□□ -0.01
TTC28Q96AY4 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC14.96□□□□□ -0.01
TTC28Q96AY4 AC002511.3-201ENST00000638098 420 ntBASIC14.96□□□□□ -0.01
TTC28Q96AY4 AC084364.1-201ENST00000551967 1556 ntBASIC14.96□□□□□ -0.01
TTC28Q96AY4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TTC28Q96AY4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC28Q96AY4 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.96□□□□□ -0.01
TTC28Q96AY4 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC14.96□□□□□ -0.02
TTC28Q96AY4 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
TTC28Q96AY4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TTC28Q96AY4 AHCYP4-201ENST00000419201 1315 ntBASIC14.96□□□□□ -0.02
TTC28Q96AY4 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 RPS23-207ENST00000511844 530 ntTSL 2 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 MBP-230ENST00000528160 584 ntTSL 5 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TTC28Q96AY4 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC28Q96AY4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TTC28Q96AY4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TTC28Q96AY4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC28Q96AY4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TTC28Q96AY4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 AC105020.1-201ENST00000435356 2205 ntBASIC14.95□□□□□ -0.02
TTC28Q96AY4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC28Q96AY4 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TTC28Q96AY4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 AL137783.1-201ENST00000623494 1896 ntBASIC14.95□□□□□ -0.02
TTC28Q96AY4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC28Q96AY4 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC28Q96AY4 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TTC28Q96AY4 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 MYL6-215ENST00000549566 685 ntTSL 2 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 AC120498.7-201ENST00000562876 330 ntBASIC14.95□□□□□ -0.02
TTC28Q96AY4 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 GGNBP1-204ENST00000613113 887 ntBASIC14.95□□□□□ -0.02
TTC28Q96AY4 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TTC28Q96AY4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 AL359258.3-201ENST00000622910 2331 ntBASIC14.95□□□□□ -0.02
TTC28Q96AY4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TTC28Q96AY4 AL139384.1-201ENST00000612143 3047 ntBASIC14.95□□□□□ -0.02
TTC28Q96AY4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.94□□□□□ -0.02
TTC28Q96AY4 MIR611-201ENST00000384869 67 ntBASIC14.94□□□□□ -0.02
TTC28Q96AY4 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TTC28Q96AY4 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC14.94□□□□□ -0.02
TTC28Q96AY4 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.94□□□□□ -0.02
TTC28Q96AY4 AC131206.1-201ENST00000538078 1211 ntBASIC14.94□□□□□ -0.02
TTC28Q96AY4 KRT127P-201ENST00000547183 433 ntBASIC14.94□□□□□ -0.02
TTC28Q96AY4 AC003686.1-201ENST00000550956 1034 ntBASIC14.94□□□□□ -0.02
TTC28Q96AY4 ABCC6P1-203ENST00000565566 1170 ntBASIC14.94□□□□□ -0.02
TTC28Q96AY4 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC14.94□□□□□ -0.02
TTC28Q96AY4 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC14.94□□□□□ -0.02
TTC28Q96AY4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TTC28Q96AY4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TTC28Q96AY4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.94□□□□□ -0.02
TTC28Q96AY4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TTC28Q96AY4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.94□□□□□ -0.02
TTC28Q96AY4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TTC28Q96AY4 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TTC28Q96AY4 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TTC28Q96AY4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TTC28Q96AY4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms