Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP6NLQ92738 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP6NLQ92738 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.07■□□□□ 0.32
USP6NLQ92738 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
USP6NLQ92738 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP6NLQ92738 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP6NLQ92738 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
USP6NLQ92738 AC098935.1-201ENST00000446057 611 ntBASIC17.07■□□□□ 0.32
USP6NLQ92738 FGFR3P1-201ENST00000449999 601 ntBASIC17.07■□□□□ 0.32
USP6NLQ92738 AC073150.1-201ENST00000450406 1084 ntBASIC17.07■□□□□ 0.32
USP6NLQ92738 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.07■□□□□ 0.32
USP6NLQ92738 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
USP6NLQ92738 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.07■□□□□ 0.32
USP6NLQ92738 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP6NLQ92738 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC17.07■□□□□ 0.32
USP6NLQ92738 MIR4750-201ENST00000584564 56 ntBASIC17.07■□□□□ 0.32
USP6NLQ92738 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
USP6NLQ92738 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.07■□□□□ 0.32
USP6NLQ92738 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP6NLQ92738 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP6NLQ92738 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
USP6NLQ92738 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.07■□□□□ 0.32
USP6NLQ92738 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP6NLQ92738 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.07■□□□□ 0.32
USP6NLQ92738 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP6NLQ92738 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.07■□□□□ 0.32
USP6NLQ92738 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.07■□□□□ 0.32
USP6NLQ92738 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP6NLQ92738 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
USP6NLQ92738 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP6NLQ92738 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
USP6NLQ92738 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP6NLQ92738 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP6NLQ92738 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.06■□□□□ 0.32
USP6NLQ92738 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
USP6NLQ92738 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP6NLQ92738 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
USP6NLQ92738 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP6NLQ92738 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
USP6NLQ92738 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
USP6NLQ92738 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP6NLQ92738 FAM90A7P-201ENST00000382628 1395 ntBASIC17.06■□□□□ 0.32
USP6NLQ92738 FAM90A23P-201ENST00000400136 1395 ntBASIC17.06■□□□□ 0.32
USP6NLQ92738 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP6NLQ92738 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP6NLQ92738 RN7SKP230-201ENST00000365642 335 ntBASIC17.06■□□□□ 0.32
USP6NLQ92738 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP6NLQ92738 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP6NLQ92738 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP6NLQ92738 RCC2P8-201ENST00000502779 1035 ntBASIC17.06■□□□□ 0.32
USP6NLQ92738 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.06■□□□□ 0.32
USP6NLQ92738 NPM1P43-201ENST00000558669 786 ntBASIC17.06■□□□□ 0.32
USP6NLQ92738 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.06■□□□□ 0.32
USP6NLQ92738 AC132192.2-201ENST00000596206 1147 ntBASIC17.06■□□□□ 0.32
USP6NLQ92738 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP6NLQ92738 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP6NLQ92738 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
USP6NLQ92738 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP6NLQ92738 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP6NLQ92738 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.06■□□□□ 0.32
USP6NLQ92738 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP6NLQ92738 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP6NLQ92738 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP6NLQ92738 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP6NLQ92738 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP6NLQ92738 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP6NLQ92738 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP6NLQ92738 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP6NLQ92738 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.06■□□□□ 0.32
USP6NLQ92738 AC011840.2-201ENST00000563063 1520 ntBASIC17.06■□□□□ 0.32
USP6NLQ92738 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP6NLQ92738 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP6NLQ92738 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP6NLQ92738 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP6NLQ92738 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.05■□□□□ 0.32
USP6NLQ92738 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
USP6NLQ92738 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.05■□□□□ 0.32
USP6NLQ92738 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP6NLQ92738 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USP6NLQ92738 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP6NLQ92738 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.05■□□□□ 0.32
USP6NLQ92738 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.05■□□□□ 0.32
USP6NLQ92738 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP6NLQ92738 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
USP6NLQ92738 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP6NLQ92738 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.05■□□□□ 0.32
USP6NLQ92738 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP6NLQ92738 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP6NLQ92738 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USP6NLQ92738 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC17.05■□□□□ 0.32
USP6NLQ92738 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.05■□□□□ 0.32
USP6NLQ92738 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP6NLQ92738 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.05■□□□□ 0.32
USP6NLQ92738 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP6NLQ92738 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
USP6NLQ92738 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP6NLQ92738 AL603832.2-201ENST00000566195 2125 ntBASIC17.05■□□□□ 0.32
USP6NLQ92738 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP6NLQ92738 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP6NLQ92738 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms