Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 AC026410.3-201ENST00000514280 936 ntBASIC13.98□□□□□ -0.17
LSMEM1Q8N8F7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.98□□□□□ -0.17
LSMEM1Q8N8F7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.98□□□□□ -0.17
LSMEM1Q8N8F7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.98□□□□□ -0.17
LSMEM1Q8N8F7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.98□□□□□ -0.17
LSMEM1Q8N8F7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.98□□□□□ -0.17
LSMEM1Q8N8F7 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.98□□□□□ -0.17
LSMEM1Q8N8F7 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LSMEM1Q8N8F7 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LSMEM1Q8N8F7 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LSMEM1Q8N8F7 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LSMEM1Q8N8F7 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
LSMEM1Q8N8F7 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LSMEM1Q8N8F7 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
LSMEM1Q8N8F7 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LSMEM1Q8N8F7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LSMEM1Q8N8F7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.98□□□□□ -0.17
LSMEM1Q8N8F7 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LSMEM1Q8N8F7 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LSMEM1Q8N8F7 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.98□□□□□ -0.17
LSMEM1Q8N8F7 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.98□□□□□ -0.17
LSMEM1Q8N8F7 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 AC104794.3-201ENST00000566840 1248 ntBASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 AC027612.1-201ENST00000445234 2395 ntBASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LSMEM1Q8N8F7 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LSMEM1Q8N8F7 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms