Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 GOLGA2P4-201ENST00000441462 777 ntBASIC16.53■□□□□ 0.24
VPS52Q8N1B4 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.53■□□□□ 0.24
VPS52Q8N1B4 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.53■□□□□ 0.24
VPS52Q8N1B4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.53■□□□□ 0.24
VPS52Q8N1B4 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.53■□□□□ 0.24
VPS52Q8N1B4 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.53■□□□□ 0.24
VPS52Q8N1B4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.53■□□□□ 0.24
VPS52Q8N1B4 AL139099.5-201ENST00000635274 300 ntBASIC16.53■□□□□ 0.24
VPS52Q8N1B4 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.53■□□□□ 0.24
VPS52Q8N1B4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VPS52Q8N1B4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS52Q8N1B4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.53■□□□□ 0.24
VPS52Q8N1B4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VPS52Q8N1B4 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VPS52Q8N1B4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.53■□□□□ 0.24
VPS52Q8N1B4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
VPS52Q8N1B4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
VPS52Q8N1B4 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
VPS52Q8N1B4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
VPS52Q8N1B4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.53■□□□□ 0.24
VPS52Q8N1B4 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS52Q8N1B4 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS52Q8N1B4 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
VPS52Q8N1B4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS52Q8N1B4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VPS52Q8N1B4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VPS52Q8N1B4 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VPS52Q8N1B4 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VPS52Q8N1B4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VPS52Q8N1B4 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
VPS52Q8N1B4 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VPS52Q8N1B4 SBF1P1-201ENST00000444527 5631 ntBASIC16.52■□□□□ 0.24
VPS52Q8N1B4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VPS52Q8N1B4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
VPS52Q8N1B4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.52■□□□□ 0.24
VPS52Q8N1B4 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VPS52Q8N1B4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VPS52Q8N1B4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.52■□□□□ 0.24
VPS52Q8N1B4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
VPS52Q8N1B4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VPS52Q8N1B4 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VPS52Q8N1B4 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
VPS52Q8N1B4 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
VPS52Q8N1B4 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.52■□□□□ 0.24
VPS52Q8N1B4 Z93015.1-201ENST00000451718 390 ntBASIC16.52■□□□□ 0.24
VPS52Q8N1B4 KRT8P13-201ENST00000463294 1010 ntBASIC16.52■□□□□ 0.24
VPS52Q8N1B4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VPS52Q8N1B4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.52■□□□□ 0.24
VPS52Q8N1B4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.24
VPS52Q8N1B4 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.52■□□□□ 0.24
VPS52Q8N1B4 MIR4741-201ENST00000579822 90 ntBASIC16.52■□□□□ 0.24
VPS52Q8N1B4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.52■□□□□ 0.24
VPS52Q8N1B4 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.52■□□□□ 0.24
VPS52Q8N1B4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
VPS52Q8N1B4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.52■□□□□ 0.23
VPS52Q8N1B4 AC097376.2-205ENST00000610159 5334 ntBASIC16.52■□□□□ 0.23
VPS52Q8N1B4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VPS52Q8N1B4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.52■□□□□ 0.23
VPS52Q8N1B4 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
VPS52Q8N1B4 OR2I1P-210ENST00000642037 4691 ntBASIC16.52■□□□□ 0.23
VPS52Q8N1B4 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VPS52Q8N1B4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
VPS52Q8N1B4 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 MIR1202-201ENST00000408529 83 ntBASIC16.51■□□□□ 0.23
VPS52Q8N1B4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 AL022328.3-201ENST00000607943 679 ntBASIC16.51■□□□□ 0.23
VPS52Q8N1B4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms