Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.08■□□□□ 0.16
VARS2Q5ST30 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VARS2Q5ST30 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VARS2Q5ST30 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VARS2Q5ST30 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VARS2Q5ST30 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
VARS2Q5ST30 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.07■□□□□ 0.16
VARS2Q5ST30 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.07■□□□□ 0.16
VARS2Q5ST30 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VARS2Q5ST30 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.07■□□□□ 0.16
VARS2Q5ST30 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VARS2Q5ST30 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VARS2Q5ST30 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VARS2Q5ST30 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VARS2Q5ST30 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC16.07■□□□□ 0.16
VARS2Q5ST30 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.07■□□□□ 0.16
VARS2Q5ST30 CHMP1AP1-201ENST00000445563 662 ntBASIC16.07■□□□□ 0.16
VARS2Q5ST30 HIST2H2BB-201ENST00000449108 381 ntBASIC16.07■□□□□ 0.16
VARS2Q5ST30 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.07■□□□□ 0.16
VARS2Q5ST30 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.07■□□□□ 0.16
VARS2Q5ST30 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.07■□□□□ 0.16
VARS2Q5ST30 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
VARS2Q5ST30 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC16.07■□□□□ 0.16
VARS2Q5ST30 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.07■□□□□ 0.16
VARS2Q5ST30 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VARS2Q5ST30 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC16.07■□□□□ 0.16
VARS2Q5ST30 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.07■□□□□ 0.16
VARS2Q5ST30 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.07■□□□□ 0.16
VARS2Q5ST30 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VARS2Q5ST30 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.07■□□□□ 0.16
VARS2Q5ST30 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.07■□□□□ 0.16
VARS2Q5ST30 AC018735.1-201ENST00000437208 1502 ntBASIC16.07■□□□□ 0.16
VARS2Q5ST30 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.07■□□□□ 0.16
VARS2Q5ST30 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.07■□□□□ 0.16
VARS2Q5ST30 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VARS2Q5ST30 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.07■□□□□ 0.16
VARS2Q5ST30 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.07■□□□□ 0.16
VARS2Q5ST30 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
VARS2Q5ST30 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VARS2Q5ST30 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
VARS2Q5ST30 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
VARS2Q5ST30 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
VARS2Q5ST30 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
VARS2Q5ST30 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.06■□□□□ 0.16
VARS2Q5ST30 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.06■□□□□ 0.16
VARS2Q5ST30 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.06■□□□□ 0.16
VARS2Q5ST30 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.06■□□□□ 0.16
VARS2Q5ST30 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.06■□□□□ 0.16
VARS2Q5ST30 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.06■□□□□ 0.16
VARS2Q5ST30 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.06■□□□□ 0.16
VARS2Q5ST30 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VARS2Q5ST30 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
VARS2Q5ST30 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
VARS2Q5ST30 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
VARS2Q5ST30 FKBP4P6-201ENST00000457486 1332 ntBASIC16.06■□□□□ 0.16
VARS2Q5ST30 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
VARS2Q5ST30 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VARS2Q5ST30 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
VARS2Q5ST30 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VARS2Q5ST30 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VARS2Q5ST30 AC004898.1-201ENST00000451057 766 ntBASIC16.06■□□□□ 0.16
VARS2Q5ST30 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.06■□□□□ 0.16
VARS2Q5ST30 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.06■□□□□ 0.16
VARS2Q5ST30 AL356019.1-201ENST00000553419 748 ntTSL 2 BASIC16.06■□□□□ 0.16
VARS2Q5ST30 AL096869.2-202ENST00000557007 1237 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VARS2Q5ST30 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VARS2Q5ST30 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.06■□□□□ 0.16
VARS2Q5ST30 MKKS-203ENST00000609375 882 ntTSL 2 BASIC16.06■□□□□ 0.16
VARS2Q5ST30 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.06■□□□□ 0.16
VARS2Q5ST30 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VARS2Q5ST30 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VARS2Q5ST30 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VARS2Q5ST30 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.06■□□□□ 0.16
VARS2Q5ST30 C18orf15-201ENST00000623680 2534 ntBASIC16.06■□□□□ 0.16
VARS2Q5ST30 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.06■□□□□ 0.16
VARS2Q5ST30 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VARS2Q5ST30 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
VARS2Q5ST30 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
VARS2Q5ST30 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.06■□□□□ 0.16
VARS2Q5ST30 AC112693.3-201ENST00000624819 1983 ntBASIC16.06■□□□□ 0.16
VARS2Q5ST30 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VARS2Q5ST30 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
VARS2Q5ST30 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
VARS2Q5ST30 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VARS2Q5ST30 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VARS2Q5ST30 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
VARS2Q5ST30 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.05■□□□□ 0.16
VARS2Q5ST30 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VARS2Q5ST30 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.05■□□□□ 0.16
VARS2Q5ST30 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.05■□□□□ 0.16
VARS2Q5ST30 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
VARS2Q5ST30 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.05■□□□□ 0.16
VARS2Q5ST30 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.05■□□□□ 0.16
VARS2Q5ST30 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VARS2Q5ST30 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.05■□□□□ 0.16
VARS2Q5ST30 AC136621.1-201ENST00000624017 2304 ntBASIC16.05■□□□□ 0.16
VARS2Q5ST30 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
VARS2Q5ST30 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.05■□□□□ 0.16
VARS2Q5ST30 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VARS2Q5ST30 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms