Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.08□□□□□ -0.32
CD40P25942 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CD40P25942 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.07□□□□□ -0.32
CD40P25942 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CD40P25942 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CD40P25942 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CD40P25942 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.07□□□□□ -0.32
CD40P25942 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.07□□□□□ -0.32
CD40P25942 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CD40P25942 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.07□□□□□ -0.32
CD40P25942 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.07□□□□□ -0.32
CD40P25942 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 FTLP10-202ENST00000505798 471 ntBASIC13.07□□□□□ -0.32
CD40P25942 FAM86HP-204ENST00000513466 959 ntBASIC13.07□□□□□ -0.32
CD40P25942 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.07□□□□□ -0.32
CD40P25942 C2orf69P2-201ENST00000562032 1123 ntBASIC13.07□□□□□ -0.32
CD40P25942 MIR4525-201ENST00000580000 75 ntBASIC13.07□□□□□ -0.32
CD40P25942 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.07□□□□□ -0.32
CD40P25942 EEF1DP1-201ENST00000585891 896 ntBASIC13.07□□□□□ -0.32
CD40P25942 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.07□□□□□ -0.32
CD40P25942 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.07□□□□□ -0.32
CD40P25942 OR10B1P-201ENST00000601666 907 ntBASIC13.07□□□□□ -0.32
CD40P25942 AC091271.1-201ENST00000611877 1162 ntBASIC13.07□□□□□ -0.32
CD40P25942 MIR6869-201ENST00000619434 62 ntBASIC13.07□□□□□ -0.32
CD40P25942 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.07□□□□□ -0.32
CD40P25942 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.07□□□□□ -0.32
CD40P25942 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CD40P25942 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CD40P25942 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.07□□□□□ -0.32
CD40P25942 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CD40P25942 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.07□□□□□ -0.32
CD40P25942 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40P25942 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CD40P25942 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.07□□□□□ -0.32
CD40P25942 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.07□□□□□ -0.32
CD40P25942 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD40P25942 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD40P25942 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD40P25942 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD40P25942 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CD40P25942 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD40P25942 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CD40P25942 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD40P25942 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CD40P25942 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD40P25942 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD40P25942 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD40P25942 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD40P25942 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD40P25942 MIR326-201ENST00000362220 95 ntBASIC13.06□□□□□ -0.32
CD40P25942 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.06□□□□□ -0.32
CD40P25942 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.06□□□□□ -0.32
CD40P25942 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CD40P25942 BTBD6P1-201ENST00000412176 1267 ntBASIC13.06□□□□□ -0.32
CD40P25942 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD40P25942 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.06□□□□□ -0.32
CD40P25942 AC108725.1-201ENST00000495472 409 ntBASIC13.06□□□□□ -0.32
CD40P25942 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.06□□□□□ -0.32
CD40P25942 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.06□□□□□ -0.32
CD40P25942 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.06□□□□□ -0.32
CD40P25942 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD40P25942 AP006547.1-201ENST00000563435 692 ntBASIC13.06□□□□□ -0.32
CD40P25942 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.06□□□□□ -0.32
CD40P25942 RN7SL713P-201ENST00000582127 302 ntBASIC13.06□□□□□ -0.32
CD40P25942 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.06□□□□□ -0.32
CD40P25942 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD40P25942 AC004466.1-201ENST00000599515 1080 ntBASIC13.06□□□□□ -0.32
CD40P25942 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD40P25942 AC138466.3-201ENST00000619983 221 ntBASIC13.06□□□□□ -0.32
CD40P25942 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.06□□□□□ -0.32
CD40P25942 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.06□□□□□ -0.32
CD40P25942 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD40P25942 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms