Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 PPT1-215ENST00000641471 2368 ntBASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 AC026954.1-201ENST00000429771 1293 ntBASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 AL355994.2-201ENST00000447882 704 ntBASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 GNRHR2-203ENST00000581100 1187 ntBASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 KRT8P35-201ENST00000483942 1338 ntBASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA2E9PIF3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 C18orf15-201ENST00000623680 2534 ntBASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 MIR1908-201ENST00000410394 80 ntBASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 MIR4525-201ENST00000580000 75 ntBASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 AC145423.3-201ENST00000615987 467 ntBASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPA2E9PIF3 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.86□□□□□ -0.19
NPIPA2E9PIF3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPA2E9PIF3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPA2E9PIF3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms