Protein–RNA interactions for Protein: Q9UPW0

FOXJ3, Forkhead box protein J3, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXJ3Q9UPW0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 AC025181.2-201ENST00000606994 802 ntBASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 AL513210.1-201ENST00000629608 234 ntBASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 AC015802.1-201ENST00000588104 1449 ntBASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 Z97205.2-201ENST00000564697 1639 ntBASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 AC007326.2-201ENST00000624224 7579 ntBASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FOXJ3Q9UPW0 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 AL359881.3-201ENST00000602640 1721 ntBASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 AC074338.1-201ENST00000416825 156 ntBASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 AC007967.4-201ENST00000614700 386 ntBASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 MIR6069-201ENST00000620069 79 ntBASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
FOXJ3Q9UPW0 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms