Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 ACTBP8-201ENST00000403258 1108 ntBASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 AC068587.3-201ENST00000526613 355 ntBASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 TDH-203ENST00000531764 1110 ntBASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 REXO1L2P-201ENST00000425429 2069 ntBASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 AL359258.3-201ENST00000622910 2331 ntBASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 KRT8P35-201ENST00000483942 1338 ntBASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 OR2I1P-209ENST00000641730 5365 ntBASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 NME2P1-201ENST00000426182 414 ntBASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 TTTY23B-201ENST00000442790 549 ntBASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 AC012441.1-201ENST00000446669 685 ntBASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 AL603764.1-201ENST00000636452 321 ntBASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CCDC148Q8NFR7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 LILRP1-201ENST00000444199 1370 ntBASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 AL157414.3-201ENST00000624276 1954 ntBASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 REXO1L5P-201ENST00000622260 2098 ntBASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 BAATP1-201ENST00000412284 1225 ntBASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 KRT17P7-201ENST00000451704 1104 ntBASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 CR383656.12-201ENST00000549567 513 ntBASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 235 ms