Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 AC004923.1-202ENST00000642106 209 ntBASIC17.97■□□□□ 0.47
TNNI2P48788 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNNI2P48788 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TNNI2P48788 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TNNI2P48788 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.97■□□□□ 0.47
TNNI2P48788 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.97■□□□□ 0.47
TNNI2P48788 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.97■□□□□ 0.47
TNNI2P48788 REXO1L5P-201ENST00000622260 2098 ntBASIC17.97■□□□□ 0.47
TNNI2P48788 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TNNI2P48788 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.97■□□□□ 0.47
TNNI2P48788 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TNNI2P48788 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNNI2P48788 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.97■□□□□ 0.47
TNNI2P48788 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.97■□□□□ 0.47
TNNI2P48788 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.97■□□□□ 0.47
TNNI2P48788 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TNNI2P48788 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TNNI2P48788 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNNI2P48788 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNNI2P48788 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TNNI2P48788 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TNNI2P48788 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.96■□□□□ 0.47
TNNI2P48788 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNNI2P48788 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TNNI2P48788 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TNNI2P48788 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNNI2P48788 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.96■□□□□ 0.47
TNNI2P48788 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNNI2P48788 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNNI2P48788 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TNNI2P48788 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNNI2P48788 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TNNI2P48788 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TNNI2P48788 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.96■□□□□ 0.47
TNNI2P48788 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.96■□□□□ 0.47
TNNI2P48788 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.96■□□□□ 0.47
TNNI2P48788 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.96■□□□□ 0.47
TNNI2P48788 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TNNI2P48788 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.96■□□□□ 0.47
TNNI2P48788 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.96■□□□□ 0.47
TNNI2P48788 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.96■□□□□ 0.47
TNNI2P48788 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNNI2P48788 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.96■□□□□ 0.47
TNNI2P48788 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TNNI2P48788 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNNI2P48788 AL136301.1-201ENST00000615830 422 ntBASIC17.96■□□□□ 0.47
TNNI2P48788 AL136295.7-201ENST00000619226 1200 ntBASIC17.96■□□□□ 0.47
TNNI2P48788 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.96■□□□□ 0.47
TNNI2P48788 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNNI2P48788 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TNNI2P48788 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNNI2P48788 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNNI2P48788 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.96■□□□□ 0.47
TNNI2P48788 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.96■□□□□ 0.47
TNNI2P48788 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNNI2P48788 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNNI2P48788 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.96■□□□□ 0.46
TNNI2P48788 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNNI2P48788 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNNI2P48788 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.95■□□□□ 0.46
TNNI2P48788 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.95■□□□□ 0.46
TNNI2P48788 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.95■□□□□ 0.46
TNNI2P48788 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.95■□□□□ 0.46
TNNI2P48788 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.95■□□□□ 0.46
TNNI2P48788 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.95■□□□□ 0.46
TNNI2P48788 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNNI2P48788 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNNI2P48788 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNNI2P48788 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNNI2P48788 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNNI2P48788 TMEM198B-204ENST00000484016 896 ntBASIC17.95■□□□□ 0.46
TNNI2P48788 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TNNI2P48788 AC026434.2-201ENST00000506094 1078 ntBASIC17.95■□□□□ 0.46
TNNI2P48788 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.95■□□□□ 0.46
TNNI2P48788 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.95■□□□□ 0.46
TNNI2P48788 AC100827.2-201ENST00000563214 1194 ntBASIC17.95■□□□□ 0.46
TNNI2P48788 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TNNI2P48788 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.95■□□□□ 0.46
TNNI2P48788 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17.95■□□□□ 0.46
TNNI2P48788 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNNI2P48788 AC002472.3-201ENST00000640124 621 ntBASIC17.95■□□□□ 0.46
TNNI2P48788 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNNI2P48788 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNNI2P48788 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNNI2P48788 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
TNNI2P48788 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TNNI2P48788 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNNI2P48788 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.95■□□□□ 0.46
TNNI2P48788 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNNI2P48788 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
TNNI2P48788 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TNNI2P48788 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.94■□□□□ 0.46
TNNI2P48788 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNNI2P48788 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.94■□□□□ 0.46
TNNI2P48788 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNNI2P48788 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TNNI2P48788 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
TNNI2P48788 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TNNI2P48788 AC092850.2-201ENST00000623821 2697 ntBASIC17.94■□□□□ 0.46
TNNI2P48788 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms