Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC6A4P31645 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC6A4P31645 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.55■□□□□ 0.08
SLC6A4P31645 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A4P31645 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC6A4P31645 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A4P31645 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A4P31645 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A4P31645 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.55■□□□□ 0.08
SLC6A4P31645 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SLC6A4P31645 MIR1908-201ENST00000410394 80 ntBASIC15.55■□□□□ 0.08
SLC6A4P31645 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC6A4P31645 CNN2P10-201ENST00000443067 918 ntBASIC15.55■□□□□ 0.08
SLC6A4P31645 RPL13AP20-201ENST00000459725 609 ntBASIC15.55■□□□□ 0.08
SLC6A4P31645 MESTP3-201ENST00000503460 968 ntBASIC15.55■□□□□ 0.08
SLC6A4P31645 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A4P31645 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
SLC6A4P31645 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC6A4P31645 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.55■□□□□ 0.08
SLC6A4P31645 MIR4741-201ENST00000579822 90 ntBASIC15.55■□□□□ 0.08
SLC6A4P31645 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SLC6A4P31645 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A4P31645 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A4P31645 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A4P31645 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
SLC6A4P31645 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC6A4P31645 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A4P31645 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
SLC6A4P31645 ACE3P-201ENST00000423435 1973 ntBASIC15.55■□□□□ 0.08
SLC6A4P31645 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC6A4P31645 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC6A4P31645 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.54■□□□□ 0.08
SLC6A4P31645 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC6A4P31645 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC6A4P31645 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SLC6A4P31645 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC6A4P31645 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC6A4P31645 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SLC6A4P31645 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SLC6A4P31645 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC6A4P31645 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC6A4P31645 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC6A4P31645 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC6A4P31645 TUBB1P2-201ENST00000422712 1306 ntBASIC15.54■□□□□ 0.08
SLC6A4P31645 TUBB1P1-201ENST00000503144 1300 ntBASIC15.54■□□□□ 0.08
SLC6A4P31645 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC6A4P31645 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC6A4P31645 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC6A4P31645 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC6A4P31645 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.54■□□□□ 0.08
SLC6A4P31645 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC6A4P31645 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC6A4P31645 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
SLC6A4P31645 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC6A4P31645 AP006547.1-201ENST00000563435 692 ntBASIC15.54■□□□□ 0.08
SLC6A4P31645 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC6A4P31645 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.54■□□□□ 0.08
SLC6A4P31645 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC6A4P31645 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.54■□□□□ 0.08
SLC6A4P31645 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC6A4P31645 AC073413.1-201ENST00000603927 732 ntBASIC15.54■□□□□ 0.08
SLC6A4P31645 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC6A4P31645 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
SLC6A4P31645 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC6A4P31645 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC6A4P31645 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
SLC6A4P31645 INE2-201ENST00000630399 1874 ntBASIC15.54■□□□□ 0.08
SLC6A4P31645 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
SLC6A4P31645 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC6A4P31645 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC6A4P31645 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC6A4P31645 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC6A4P31645 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SLC6A4P31645 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC6A4P31645 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC6A4P31645 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC6A4P31645 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC6A4P31645 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC6A4P31645 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC6A4P31645 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC6A4P31645 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC6A4P31645 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC6A4P31645 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC6A4P31645 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SLC6A4P31645 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
SLC6A4P31645 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SLC6A4P31645 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC6A4P31645 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC6A4P31645 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SLC6A4P31645 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC6A4P31645 ZBED1P1-201ENST00000502364 1930 ntBASIC15.53■□□□□ 0.08
SLC6A4P31645 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC6A4P31645 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC6A4P31645 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC6A4P31645 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC6A4P31645 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC6A4P31645 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC6A4P31645 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC6A4P31645 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC6A4P31645 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms