Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HMGB4Q8WW32 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGB4Q8WW32 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGB4Q8WW32 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.23■□□□□ 0.03
HMGB4Q8WW32 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGB4Q8WW32 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HMGB4Q8WW32 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.22■□□□□ 0.03
HMGB4Q8WW32 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 RPL5P21-201ENST00000404620 815 ntBASIC15.22■□□□□ 0.03
HMGB4Q8WW32 GHSR-202ENST00000427970 912 ntBASIC15.22■□□□□ 0.03
HMGB4Q8WW32 HLA-K-203ENST00000430151 1046 ntBASIC15.22■□□□□ 0.03
HMGB4Q8WW32 Z97180.1-201ENST00000445173 988 ntBASIC15.22■□□□□ 0.03
HMGB4Q8WW32 RN7SL769P-201ENST00000469386 295 ntBASIC15.22■□□□□ 0.03
HMGB4Q8WW32 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 IMP3P2-201ENST00000489760 475 ntBASIC15.22■□□□□ 0.03
HMGB4Q8WW32 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 AC091812.3-201ENST00000621362 345 ntBASIC15.22■□□□□ 0.03
HMGB4Q8WW32 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HMGB4Q8WW32 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 FKBP4P6-201ENST00000457486 1332 ntBASIC15.21■□□□□ 0.03
HMGB4Q8WW32 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 AC009090.5-201ENST00000624886 2285 ntBASIC15.21■□□□□ 0.03
HMGB4Q8WW32 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 RNMTL1P1-201ENST00000454103 560 ntBASIC15.21■□□□□ 0.03
HMGB4Q8WW32 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 AC097724.1-201ENST00000609581 426 ntBASIC15.21■□□□□ 0.03
HMGB4Q8WW32 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HMGB4Q8WW32 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HMGB4Q8WW32 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
HMGB4Q8WW32 KRT8P29-201ENST00000420409 1371 ntBASIC15.21■□□□□ 0.02
HMGB4Q8WW32 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.21■□□□□ 0.02
HMGB4Q8WW32 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.21■□□□□ 0.02
HMGB4Q8WW32 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
HMGB4Q8WW32 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
HMGB4Q8WW32 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms