Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM1P09493 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
TPM1P09493 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.87■□□□□ 0.29
TPM1P09493 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM1P09493 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM1P09493 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TPM1P09493 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM1P09493 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
TPM1P09493 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TPM1P09493 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM1P09493 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM1P09493 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM1P09493 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC16.86■□□□□ 0.29
TPM1P09493 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TPM1P09493 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM1P09493 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.86■□□□□ 0.29
TPM1P09493 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TPM1P09493 FUK-202ENST00000378912 3925 ntTSL 2 BASIC16.86■□□□□ 0.29
TPM1P09493 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TPM1P09493 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM1P09493 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM1P09493 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM1P09493 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM1P09493 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM1P09493 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
TPM1P09493 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.86■□□□□ 0.29
TPM1P09493 KRT126P-201ENST00000549467 1181 ntBASIC16.86■□□□□ 0.29
TPM1P09493 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.86■□□□□ 0.29
TPM1P09493 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.86■□□□□ 0.29
TPM1P09493 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.86■□□□□ 0.29
TPM1P09493 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM1P09493 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM1P09493 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM1P09493 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.86■□□□□ 0.29
TPM1P09493 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TPM1P09493 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.86■□□□□ 0.29
TPM1P09493 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.86■□□□□ 0.29
TPM1P09493 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TPM1P09493 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TPM1P09493 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TPM1P09493 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM1P09493 MBLAC2-202ENST00000514906 1936 ntBASIC16.86■□□□□ 0.29
TPM1P09493 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM1P09493 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.86■□□□□ 0.29
TPM1P09493 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.86■□□□□ 0.29
TPM1P09493 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TPM1P09493 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM1P09493 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TPM1P09493 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.85■□□□□ 0.29
TPM1P09493 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM1P09493 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM1P09493 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPM1P09493 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM1P09493 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
TPM1P09493 MTHFR-210ENST00000641407 2387 ntBASIC16.85■□□□□ 0.29
TPM1P09493 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPM1P09493 AC027601.5-201ENST00000624065 2482 ntBASIC16.85■□□□□ 0.29
TPM1P09493 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM1P09493 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM1P09493 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM1P09493 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.85■□□□□ 0.29
TPM1P09493 YBX2P1-201ENST00000394192 760 ntBASIC16.85■□□□□ 0.29
TPM1P09493 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.85■□□□□ 0.29
TPM1P09493 AL590627.1-203ENST00000421194 1026 ntBASIC16.85■□□□□ 0.29
TPM1P09493 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.85■□□□□ 0.29
TPM1P09493 TARDBPP1-201ENST00000442013 1203 ntBASIC16.85■□□□□ 0.29
TPM1P09493 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.85■□□□□ 0.29
TPM1P09493 AC069335.1-201ENST00000489972 472 ntBASIC16.85■□□□□ 0.29
TPM1P09493 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.85■□□□□ 0.29
TPM1P09493 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.85■□□□□ 0.29
TPM1P09493 AC015910.1-201ENST00000579400 975 ntBASIC16.85■□□□□ 0.29
TPM1P09493 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.85■□□□□ 0.29
TPM1P09493 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.85■□□□□ 0.29
TPM1P09493 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.85■□□□□ 0.29
TPM1P09493 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPM1P09493 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPM1P09493 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TPM1P09493 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM1P09493 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM1P09493 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TPM1P09493 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.85■□□□□ 0.29
TPM1P09493 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM1P09493 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.85■□□□□ 0.29
TPM1P09493 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPM1P09493 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TPM1P09493 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPM1P09493 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPM1P09493 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TPM1P09493 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC16.85■□□□□ 0.29
TPM1P09493 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TPM1P09493 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM1P09493 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TPM1P09493 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TPM1P09493 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM1P09493 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TPM1P09493 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM1P09493 AC113367.3-201ENST00000508316 1912 ntBASIC16.84■□□□□ 0.29
TPM1P09493 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.84■□□□□ 0.29
TPM1P09493 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TPM1P09493 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms