Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 AGAP7P-201ENST00000582299 2062 ntBASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 AGAP14-201ENST00000624701 2060 ntBASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 MIR1908-201ENST00000410394 80 ntBASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 FAM21FP-201ENST00000426241 1131 ntBASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 DUX4L47-201ENST00000566374 394 ntBASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 ENPP7P14-201ENST00000621765 1040 ntBASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 WASH3P-207ENST00000560956 1394 ntBASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 TNRC18P2-201ENST00000417666 2714 ntBASIC18.5■□□□□ 0.55
HMG20BQ9P0W2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 MPV17-205ENST00000402310 906 ntTSL 5 BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 MIR1202-201ENST00000408529 83 ntBASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 CD8B2-202ENST00000417670 633 ntBASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 OLR1-203ENST00000432556 950 ntTSL 2 BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 YBX1P6-201ENST00000442962 1002 ntBASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 PFN2-215ENST00000497148 743 ntTSL 4 BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 AC092658.1-201ENST00000505836 891 ntBASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 DUX4L45-201ENST00000566406 1057 ntBASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 AC004466.1-201ENST00000599515 1080 ntBASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 AC009542.2-202ENST00000619004 1067 ntBASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 AHCYP2-201ENST00000430630 1300 ntBASIC18.49■□□□□ 0.55
HMG20BQ9P0W2 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 POM121L8P-201ENST00000417732 1281 ntBASIC18.48■□□□□ 0.55
HMG20BQ9P0W2 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms