Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 AC023157.3-201ENST00000619086 2088 ntBASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.46□□□□□ -0.09
MKKSQ9NPJ1 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
MKKSQ9NPJ1 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MKKSQ9NPJ1 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
MKKSQ9NPJ1 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
MKKSQ9NPJ1 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.46□□□□□ -0.1
MKKSQ9NPJ1 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MKKSQ9NPJ1 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.46□□□□□ -0.1
MKKSQ9NPJ1 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
MKKSQ9NPJ1 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MKKSQ9NPJ1 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.46□□□□□ -0.1
MKKSQ9NPJ1 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 RNU1-114P-201ENST00000365297 166 ntBASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 MIR658-201ENST00000385210 100 ntBASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 AC104457.1-201ENST00000401024 814 ntBASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 ACTBP8-201ENST00000403258 1108 ntBASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 MIR1909-201ENST00000411312 80 ntBASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 KLF2P2-201ENST00000416807 1039 ntBASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 AC106760.1-201ENST00000508690 800 ntBASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 AC104989.1-201ENST00000519711 778 ntBASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MKKSQ9NPJ1 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 AL158070.2-201ENST00000623713 1621 ntBASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 AC103702.1-201ENST00000548801 2630 ntBASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 AL139094.1-201ENST00000405549 1188 ntBASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 KLF2P4-201ENST00000451959 1225 ntBASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 AC007551.1-201ENST00000457394 519 ntBASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
MKKSQ9NPJ1 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms