Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 AC026748.1-201ENST00000624349 3251 ntBASIC16.24■□□□□ 0.19
LMO3Q8TAP4 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 AL354702.1-201ENST00000442006 1960 ntBASIC16.24■□□□□ 0.19
LMO3Q8TAP4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 BAATP1-201ENST00000412284 1225 ntBASIC16.23■□□□□ 0.19
LMO3Q8TAP4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 AC010319.3-201ENST00000597028 470 ntBASIC16.23■□□□□ 0.19
LMO3Q8TAP4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 AL138709.1-201ENST00000614840 1693 ntBASIC16.23■□□□□ 0.19
LMO3Q8TAP4 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 LRRC59-203ENST00000576448 1531 ntBASIC16.23■□□□□ 0.19
LMO3Q8TAP4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LMO3Q8TAP4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 AC003102.2-201ENST00000589195 1469 ntBASIC16.22■□□□□ 0.19
LMO3Q8TAP4 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 RN7SL837P-201ENST00000463010 287 ntBASIC16.22■□□□□ 0.19
LMO3Q8TAP4 KRT18P25-201ENST00000508931 1278 ntBASIC16.22■□□□□ 0.19
LMO3Q8TAP4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.22■□□□□ 0.19
LMO3Q8TAP4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.21■□□□□ 0.19
LMO3Q8TAP4 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms