Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST2H3AQ71DI3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST2H3AQ71DI3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.46□□□□□ -0.26
HIST2H3AQ71DI3 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST2H3AQ71DI3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST2H3AQ71DI3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
HIST2H3AQ71DI3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST2H3AQ71DI3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST2H3AQ71DI3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
HIST2H3AQ71DI3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST2H3AQ71DI3 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST2H3AQ71DI3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.46□□□□□ -0.26
HIST2H3AQ71DI3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
HIST2H3AQ71DI3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST2H3AQ71DI3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 MEP1AP4-201ENST00000423244 1087 ntBASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 RN7SL399P-201ENST00000471648 279 ntBASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 AC004066.1-201ENST00000502488 802 ntBASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 RNA5SP421-201ENST00000516864 134 ntBASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 AL662799.1-202ENST00000614205 422 ntBASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 FGD5P1-202ENST00000614866 2498 ntBASIC13.45□□□□□ -0.26
HIST2H3AQ71DI3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST2H3AQ71DI3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST2H3AQ71DI3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST2H3AQ71DI3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
HIST2H3AQ71DI3 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HIST2H3AQ71DI3 AC093525.8-201ENST00000624099 1342 ntBASIC13.44□□□□□ -0.26
HIST2H3AQ71DI3 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
HIST2H3AQ71DI3 CICP23-201ENST00000605013 2741 ntBASIC13.44□□□□□ -0.26
HIST2H3AQ71DI3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST2H3AQ71DI3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST2H3AQ71DI3 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST2H3AQ71DI3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.44□□□□□ -0.26
HIST2H3AQ71DI3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.44□□□□□ -0.26
HIST2H3AQ71DI3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HIST2H3AQ71DI3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.44□□□□□ -0.26
HIST2H3AQ71DI3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms