Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A2P25067 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.89□□□□□ -0.35
COL8A2P25067 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A2P25067 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A2P25067 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.89□□□□□ -0.35
COL8A2P25067 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A2P25067 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A2P25067 AL645937.2-201ENST00000396808 931 ntBASIC12.89□□□□□ -0.35
COL8A2P25067 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.89□□□□□ -0.35
COL8A2P25067 AL139094.1-201ENST00000405549 1188 ntBASIC12.89□□□□□ -0.35
COL8A2P25067 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.89□□□□□ -0.35
COL8A2P25067 FAM21FP-201ENST00000426241 1131 ntBASIC12.89□□□□□ -0.35
COL8A2P25067 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
COL8A2P25067 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A2P25067 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.89□□□□□ -0.35
COL8A2P25067 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
COL8A2P25067 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A2P25067 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC12.89□□□□□ -0.35
COL8A2P25067 AC079316.1-201ENST00000548397 411 ntBASIC12.89□□□□□ -0.35
COL8A2P25067 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.89□□□□□ -0.35
COL8A2P25067 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A2P25067 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.89□□□□□ -0.35
COL8A2P25067 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A2P25067 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.89□□□□□ -0.35
COL8A2P25067 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.89□□□□□ -0.35
COL8A2P25067 AL645728.2-202ENST00000641679 227 ntBASIC12.89□□□□□ -0.35
COL8A2P25067 CICP11-201ENST00000434745 2827 ntBASIC12.89□□□□□ -0.35
COL8A2P25067 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A2P25067 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.89□□□□□ -0.35
COL8A2P25067 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A2P25067 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.89□□□□□ -0.35
COL8A2P25067 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.89□□□□□ -0.35
COL8A2P25067 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A2P25067 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.89□□□□□ -0.35
COL8A2P25067 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.89□□□□□ -0.35
COL8A2P25067 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A2P25067 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.89□□□□□ -0.35
COL8A2P25067 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.89□□□□□ -0.35
COL8A2P25067 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.89□□□□□ -0.35
COL8A2P25067 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A2P25067 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A2P25067 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A2P25067 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A2P25067 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A2P25067 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.89□□□□□ -0.35
COL8A2P25067 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A2P25067 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC12.88□□□□□ -0.35
COL8A2P25067 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.88□□□□□ -0.35
COL8A2P25067 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.88□□□□□ -0.35
COL8A2P25067 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
COL8A2P25067 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
COL8A2P25067 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
COL8A2P25067 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.88□□□□□ -0.35
COL8A2P25067 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 AC092658.1-201ENST00000505836 891 ntBASIC12.88□□□□□ -0.35
COL8A2P25067 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.88□□□□□ -0.35
COL8A2P25067 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.88□□□□□ -0.35
COL8A2P25067 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.88□□□□□ -0.35
COL8A2P25067 RNA5SP412-201ENST00000516234 123 ntBASIC12.88□□□□□ -0.35
COL8A2P25067 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
COL8A2P25067 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.88□□□□□ -0.35
COL8A2P25067 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.88□□□□□ -0.35
COL8A2P25067 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.88□□□□□ -0.35
COL8A2P25067 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.88□□□□□ -0.35
COL8A2P25067 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
COL8A2P25067 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
COL8A2P25067 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.88□□□□□ -0.35
COL8A2P25067 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.88□□□□□ -0.35
COL8A2P25067 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
COL8A2P25067 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
COL8A2P25067 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.88□□□□□ -0.35
COL8A2P25067 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL8A2P25067 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
COL8A2P25067 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.88□□□□□ -0.35
COL8A2P25067 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
COL8A2P25067 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms