Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC14.64□□□□□ -0.07
PDLIM1O00151 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
PDLIM1O00151 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM1O00151 AL691432.1-201ENST00000596308 1422 ntBASIC14.64□□□□□ -0.07
PDLIM1O00151 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM1O00151 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM1O00151 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM1O00151 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.64□□□□□ -0.07
PDLIM1O00151 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM1O00151 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM1O00151 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM1O00151 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.64□□□□□ -0.07
PDLIM1O00151 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM1O00151 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM1O00151 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM1O00151 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM1O00151 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.64□□□□□ -0.07
PDLIM1O00151 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM1O00151 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
PDLIM1O00151 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM1O00151 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM1O00151 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.63□□□□□ -0.07
PDLIM1O00151 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.63□□□□□ -0.07
PDLIM1O00151 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
PDLIM1O00151 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
PDLIM1O00151 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC14.63□□□□□ -0.07
PDLIM1O00151 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM1O00151 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
PDLIM1O00151 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.63□□□□□ -0.07
PDLIM1O00151 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM1O00151 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM1O00151 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM1O00151 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
PDLIM1O00151 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM1O00151 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PDLIM1O00151 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PDLIM1O00151 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM1O00151 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.63□□□□□ -0.07
PDLIM1O00151 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM1O00151 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM1O00151 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PDLIM1O00151 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM1O00151 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.63□□□□□ -0.07
PDLIM1O00151 AC254562.1-201ENST00000417586 456 ntBASIC14.63□□□□□ -0.07
PDLIM1O00151 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PDLIM1O00151 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
PDLIM1O00151 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.63□□□□□ -0.07
PDLIM1O00151 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.63□□□□□ -0.07
PDLIM1O00151 AC243562.2-201ENST00000561247 970 ntBASIC14.63□□□□□ -0.07
PDLIM1O00151 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.63□□□□□ -0.07
PDLIM1O00151 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM1O00151 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
PDLIM1O00151 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.63□□□□□ -0.07
PDLIM1O00151 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.63□□□□□ -0.07
PDLIM1O00151 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.63□□□□□ -0.07
PDLIM1O00151 AL691403.2-201ENST00000618460 490 ntBASIC14.63□□□□□ -0.07
PDLIM1O00151 AC011700.1-201ENST00000610409 2627 ntBASIC14.63□□□□□ -0.07
PDLIM1O00151 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM1O00151 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.63□□□□□ -0.07
PDLIM1O00151 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM1O00151 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM1O00151 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM1O00151 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.63□□□□□ -0.07
PDLIM1O00151 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.63□□□□□ -0.07
PDLIM1O00151 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.63□□□□□ -0.07
PDLIM1O00151 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PDLIM1O00151 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM1O00151 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM1O00151 CICP16-201ENST00000502609 2813 ntBASIC14.63□□□□□ -0.07
PDLIM1O00151 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM1O00151 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM1O00151 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PDLIM1O00151 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM1O00151 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM1O00151 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM1O00151 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.63□□□□□ -0.07
PDLIM1O00151 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.63□□□□□ -0.07
PDLIM1O00151 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM1O00151 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM1O00151 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.63□□□□□ -0.07
PDLIM1O00151 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM1O00151 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM1O00151 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.62□□□□□ -0.07
PDLIM1O00151 AP001267.2-201ENST00000532619 2086 ntBASIC14.62□□□□□ -0.07
PDLIM1O00151 AC011474.4-201ENST00000623523 2076 ntBASIC14.62□□□□□ -0.07
PDLIM1O00151 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM1O00151 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
PDLIM1O00151 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM1O00151 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.62□□□□□ -0.07
PDLIM1O00151 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM1O00151 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM1O00151 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM1O00151 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM1O00151 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PDLIM1O00151 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM1O00151 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PDLIM1O00151 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM1O00151 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PDLIM1O00151 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDLIM1O00151 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms