Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VTA1Q9NP79 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VTA1Q9NP79 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VTA1Q9NP79 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.92■□□□□ 0.3
VTA1Q9NP79 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VTA1Q9NP79 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VTA1Q9NP79 AL365203.3-201ENST00000609742 2057 ntBASIC16.92■□□□□ 0.3
VTA1Q9NP79 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VTA1Q9NP79 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.92■□□□□ 0.3
VTA1Q9NP79 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VTA1Q9NP79 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VTA1Q9NP79 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VTA1Q9NP79 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
VTA1Q9NP79 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VTA1Q9NP79 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VTA1Q9NP79 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
VTA1Q9NP79 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.91■□□□□ 0.3
VTA1Q9NP79 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VTA1Q9NP79 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VTA1Q9NP79 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
VTA1Q9NP79 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VTA1Q9NP79 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.91■□□□□ 0.3
VTA1Q9NP79 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VTA1Q9NP79 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VTA1Q9NP79 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
VTA1Q9NP79 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.91■□□□□ 0.3
VTA1Q9NP79 IMP3P2-201ENST00000489760 475 ntBASIC16.91■□□□□ 0.3
VTA1Q9NP79 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.91■□□□□ 0.3
VTA1Q9NP79 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.91■□□□□ 0.3
VTA1Q9NP79 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.91■□□□□ 0.3
VTA1Q9NP79 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.91■□□□□ 0.3
VTA1Q9NP79 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.91■□□□□ 0.3
VTA1Q9NP79 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.91■□□□□ 0.3
VTA1Q9NP79 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.91■□□□□ 0.3
VTA1Q9NP79 AC008825.2-201ENST00000603374 718 ntBASIC16.91■□□□□ 0.3
VTA1Q9NP79 AL136295.7-201ENST00000619226 1200 ntBASIC16.91■□□□□ 0.3
VTA1Q9NP79 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.91■□□□□ 0.3
VTA1Q9NP79 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.91■□□□□ 0.3
VTA1Q9NP79 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VTA1Q9NP79 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
VTA1Q9NP79 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
VTA1Q9NP79 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VTA1Q9NP79 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.91■□□□□ 0.3
VTA1Q9NP79 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.91■□□□□ 0.3
VTA1Q9NP79 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VTA1Q9NP79 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VTA1Q9NP79 AL596257.1-201ENST00000641463 2694 ntBASIC16.91■□□□□ 0.3
VTA1Q9NP79 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
VTA1Q9NP79 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VTA1Q9NP79 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
VTA1Q9NP79 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VTA1Q9NP79 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VTA1Q9NP79 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
VTA1Q9NP79 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
VTA1Q9NP79 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VTA1Q9NP79 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
VTA1Q9NP79 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VTA1Q9NP79 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VTA1Q9NP79 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VTA1Q9NP79 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VTA1Q9NP79 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.9■□□□□ 0.3
VTA1Q9NP79 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VTA1Q9NP79 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.9■□□□□ 0.3
VTA1Q9NP79 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.9■□□□□ 0.3
VTA1Q9NP79 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VTA1Q9NP79 AC024681.1-201ENST00000521917 487 ntBASIC16.9■□□□□ 0.3
VTA1Q9NP79 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.9■□□□□ 0.3
VTA1Q9NP79 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.9■□□□□ 0.3
VTA1Q9NP79 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
VTA1Q9NP79 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.9■□□□□ 0.3
VTA1Q9NP79 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
VTA1Q9NP79 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.9■□□□□ 0.3
VTA1Q9NP79 AL805961.1-203ENST00000641078 1258 ntBASIC16.9■□□□□ 0.3
VTA1Q9NP79 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
VTA1Q9NP79 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
VTA1Q9NP79 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.9■□□□□ 0.3
VTA1Q9NP79 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VTA1Q9NP79 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.9■□□□□ 0.3
VTA1Q9NP79 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.9■□□□□ 0.3
VTA1Q9NP79 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.9■□□□□ 0.3
VTA1Q9NP79 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VTA1Q9NP79 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
VTA1Q9NP79 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VTA1Q9NP79 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.9■□□□□ 0.3
VTA1Q9NP79 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VTA1Q9NP79 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VTA1Q9NP79 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms