Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 AL645937.2-201ENST00000396808 931 ntBASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 ACTBP8-201ENST00000403258 1108 ntBASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 AP005482.1-201ENST00000563722 1273 ntBASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 AL161772.1-201ENST00000610494 4412 ntBASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 REXO1L4P-201ENST00000605109 1937 ntBASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 AC126755.1-201ENST00000525846 6405 ntBASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.68■□□□□ 0.42
VAT1LQ9HCJ6 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 AC104457.1-201ENST00000401024 814 ntBASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 GHSR-202ENST00000427970 912 ntBASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 FAM197Y7-201ENST00000432892 766 ntBASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VAT1LQ9HCJ6 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VAT1LQ9HCJ6 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.66■□□□□ 0.42
VAT1LQ9HCJ6 AC091951.1-201ENST00000512854 2465 ntBASIC17.66■□□□□ 0.42
VAT1LQ9HCJ6 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
VAT1LQ9HCJ6 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
VAT1LQ9HCJ6 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VAT1LQ9HCJ6 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.66■□□□□ 0.42
VAT1LQ9HCJ6 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VAT1LQ9HCJ6 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VAT1LQ9HCJ6 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.66■□□□□ 0.42
VAT1LQ9HCJ6 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VAT1LQ9HCJ6 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
VAT1LQ9HCJ6 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.66■□□□□ 0.42
VAT1LQ9HCJ6 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VAT1LQ9HCJ6 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
VAT1LQ9HCJ6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
VAT1LQ9HCJ6 HLA-K-203ENST00000430151 1046 ntBASIC17.66■□□□□ 0.42
VAT1LQ9HCJ6 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.66■□□□□ 0.42
VAT1LQ9HCJ6 BNIP3P42-201ENST00000454982 569 ntBASIC17.66■□□□□ 0.42
VAT1LQ9HCJ6 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
VAT1LQ9HCJ6 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
VAT1LQ9HCJ6 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.66■□□□□ 0.42
VAT1LQ9HCJ6 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.66■□□□□ 0.42
VAT1LQ9HCJ6 BNIP3P29-201ENST00000598302 571 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms