Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 ACTBP8-201ENST00000403258 1108 ntBASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 AL139094.1-201ENST00000405549 1188 ntBASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 AC016694.1-201ENST00000434179 700 ntBASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 FTH1P14-201ENST00000482930 551 ntBASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 RNA5SP412-201ENST00000516234 123 ntBASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 FAM8A2P-201ENST00000528813 1142 ntBASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 AP000812.2-201ENST00000538934 718 ntBASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 MIR4538-201ENST00000581377 78 ntBASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 KRT8P44-201ENST00000441609 1350 ntBASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
ATP6V0A4Q9HBG4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 AC148477.4-201ENST00000613430 1793 ntBASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A4Q9HBG4 TUBB1P2-201ENST00000422712 1306 ntBASIC16.96■□□□□ 0.31
ATP6V0A4Q9HBG4 TUBB1P1-201ENST00000503144 1300 ntBASIC16.96■□□□□ 0.31
ATP6V0A4Q9HBG4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP6V0A4Q9HBG4 KRT8P14-201ENST00000414254 1442 ntBASIC16.96■□□□□ 0.31
ATP6V0A4Q9HBG4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.96■□□□□ 0.31
ATP6V0A4Q9HBG4 AC126365.1-201ENST00000578585 1514 ntBASIC16.96■□□□□ 0.31
ATP6V0A4Q9HBG4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP6V0A4Q9HBG4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP6V0A4Q9HBG4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP6V0A4Q9HBG4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.96■□□□□ 0.31
ATP6V0A4Q9HBG4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP6V0A4Q9HBG4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP6V0A4Q9HBG4 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms