Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1AQ96BI3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1AQ96BI3 PPT1-215ENST00000641471 2368 ntBASIC13.56□□□□□ -0.24
APH1AQ96BI3 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1AQ96BI3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APH1AQ96BI3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
APH1AQ96BI3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
APH1AQ96BI3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APH1AQ96BI3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
APH1AQ96BI3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APH1AQ96BI3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APH1AQ96BI3 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
APH1AQ96BI3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
APH1AQ96BI3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
APH1AQ96BI3 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APH1AQ96BI3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
APH1AQ96BI3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
APH1AQ96BI3 SLC25A47P1-201ENST00000531577 414 ntBASIC13.55□□□□□ -0.24
APH1AQ96BI3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
APH1AQ96BI3 BTNL10-201ENST00000595971 695 ntBASIC13.55□□□□□ -0.24
APH1AQ96BI3 AL022328.1-201ENST00000610050 478 ntBASIC13.55□□□□□ -0.24
APH1AQ96BI3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
APH1AQ96BI3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APH1AQ96BI3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APH1AQ96BI3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
APH1AQ96BI3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APH1AQ96BI3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APH1AQ96BI3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.55□□□□□ -0.24
APH1AQ96BI3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.54□□□□□ -0.24
APH1AQ96BI3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
APH1AQ96BI3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APH1AQ96BI3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.54□□□□□ -0.24
APH1AQ96BI3 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APH1AQ96BI3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APH1AQ96BI3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APH1AQ96BI3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.54□□□□□ -0.24
APH1AQ96BI3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.54□□□□□ -0.24
APH1AQ96BI3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.54□□□□□ -0.24
APH1AQ96BI3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
APH1AQ96BI3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APH1AQ96BI3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.54□□□□□ -0.24
APH1AQ96BI3 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
APH1AQ96BI3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APH1AQ96BI3 AC073347.1-201ENST00000421633 2643 ntBASIC13.54□□□□□ -0.24
APH1AQ96BI3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APH1AQ96BI3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APH1AQ96BI3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
APH1AQ96BI3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APH1AQ96BI3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.54□□□□□ -0.24
APH1AQ96BI3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APH1AQ96BI3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APH1AQ96BI3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APH1AQ96BI3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.54□□□□□ -0.24
APH1AQ96BI3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APH1AQ96BI3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
APH1AQ96BI3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APH1AQ96BI3 RNU1-114P-201ENST00000365297 166 ntBASIC13.54□□□□□ -0.24
APH1AQ96BI3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
APH1AQ96BI3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
APH1AQ96BI3 AC005229.1-201ENST00000392885 409 ntBASIC13.54□□□□□ -0.24
APH1AQ96BI3 AL139094.1-201ENST00000405549 1188 ntBASIC13.54□□□□□ -0.24
APH1AQ96BI3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APH1AQ96BI3 KLF2P2-201ENST00000416807 1039 ntBASIC13.54□□□□□ -0.24
APH1AQ96BI3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.54□□□□□ -0.24
APH1AQ96BI3 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
APH1AQ96BI3 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.54□□□□□ -0.24
APH1AQ96BI3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
APH1AQ96BI3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.54□□□□□ -0.24
APH1AQ96BI3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.54□□□□□ -0.24
APH1AQ96BI3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
APH1AQ96BI3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.54□□□□□ -0.24
APH1AQ96BI3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms