Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.23■□□□□ 0.03
CSNK1DP48730 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CSNK1DP48730 AHCYP2-201ENST00000430630 1300 ntBASIC15.23■□□□□ 0.03
CSNK1DP48730 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 TCAF2P1-201ENST00000291129 2421 ntBASIC15.23■□□□□ 0.03
CSNK1DP48730 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.23■□□□□ 0.03
CSNK1DP48730 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.23■□□□□ 0.03
CSNK1DP48730 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.23■□□□□ 0.03
CSNK1DP48730 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CSNK1DP48730 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.23■□□□□ 0.03
CSNK1DP48730 KRT223P-202ENST00000449164 1292 ntBASIC15.23■□□□□ 0.03
CSNK1DP48730 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.23■□□□□ 0.03
CSNK1DP48730 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
CSNK1DP48730 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 AC023310.1-201ENST00000554836 735 ntBASIC15.23■□□□□ 0.03
CSNK1DP48730 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.23■□□□□ 0.03
CSNK1DP48730 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.23■□□□□ 0.03
CSNK1DP48730 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.23■□□□□ 0.03
CSNK1DP48730 ECM1P1-201ENST00000604092 1279 ntBASIC15.23■□□□□ 0.03
CSNK1DP48730 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CSNK1DP48730 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.23■□□□□ 0.03
CSNK1DP48730 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CSNK1DP48730 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.23■□□□□ 0.03
CSNK1DP48730 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.23■□□□□ 0.03
CSNK1DP48730 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CSNK1DP48730 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
CSNK1DP48730 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.23■□□□□ 0.03
CSNK1DP48730 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.23■□□□□ 0.03
CSNK1DP48730 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CSNK1DP48730 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CSNK1DP48730 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1DP48730 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CSNK1DP48730 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1DP48730 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1DP48730 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CSNK1DP48730 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1DP48730 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1DP48730 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1DP48730 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.22■□□□□ 0.03
CSNK1DP48730 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CSNK1DP48730 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1DP48730 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1DP48730 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.22■□□□□ 0.03
CSNK1DP48730 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1DP48730 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1DP48730 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.22■□□□□ 0.03
CSNK1DP48730 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1DP48730 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1DP48730 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CSNK1DP48730 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1DP48730 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.22■□□□□ 0.03
CSNK1DP48730 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CSNK1DP48730 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.22■□□□□ 0.03
CSNK1DP48730 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1DP48730 AC026954.1-201ENST00000429771 1293 ntBASIC15.22■□□□□ 0.03
CSNK1DP48730 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CSNK1DP48730 FAM8A4P-201ENST00000435433 1213 ntBASIC15.22■□□□□ 0.03
CSNK1DP48730 CSF2RBP1-201ENST00000447905 391 ntBASIC15.22■□□□□ 0.03
CSNK1DP48730 AL590640.2-201ENST00000457038 527 ntBASIC15.22■□□□□ 0.03
CSNK1DP48730 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.22■□□□□ 0.03
CSNK1DP48730 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.22■□□□□ 0.03
CSNK1DP48730 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.22■□□□□ 0.03
CSNK1DP48730 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.22■□□□□ 0.03
CSNK1DP48730 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.22■□□□□ 0.03
CSNK1DP48730 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1DP48730 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1DP48730 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1DP48730 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1DP48730 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.22■□□□□ 0.03
CSNK1DP48730 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1DP48730 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.22■□□□□ 0.03
CSNK1DP48730 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.22■□□□□ 0.03
CSNK1DP48730 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1DP48730 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.22■□□□□ 0.03
CSNK1DP48730 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.22■□□□□ 0.03
CSNK1DP48730 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms