Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1A1P48729 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1A1P48729 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1A1P48729 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1A1P48729 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSNK1A1P48729 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
CSNK1A1P48729 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSNK1A1P48729 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSNK1A1P48729 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CSNK1A1P48729 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CSNK1A1P48729 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSNK1A1P48729 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.63□□□□□ -0.23
CSNK1A1P48729 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSNK1A1P48729 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.63□□□□□ -0.23
CSNK1A1P48729 INTS4P2-202ENST00000614726 2019 ntBASIC13.63□□□□□ -0.23
CSNK1A1P48729 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSNK1A1P48729 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CSNK1A1P48729 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSNK1A1P48729 REXO1L4P-201ENST00000605109 1937 ntBASIC13.63□□□□□ -0.23
CSNK1A1P48729 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CSNK1A1P48729 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CSNK1A1P48729 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.63□□□□□ -0.23
CSNK1A1P48729 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.63□□□□□ -0.23
CSNK1A1P48729 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.63□□□□□ -0.23
CSNK1A1P48729 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.63□□□□□ -0.23
CSNK1A1P48729 AC134915.1-201ENST00000426461 574 ntBASIC13.63□□□□□ -0.23
CSNK1A1P48729 AL353779.1-201ENST00000434793 351 ntBASIC13.63□□□□□ -0.23
CSNK1A1P48729 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.63□□□□□ -0.23
CSNK1A1P48729 GAPDHP40-201ENST00000505218 1006 ntBASIC13.63□□□□□ -0.23
CSNK1A1P48729 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSNK1A1P48729 BRI3BPP1-201ENST00000594224 787 ntBASIC13.63□□□□□ -0.23
CSNK1A1P48729 AL662799.1-202ENST00000614205 422 ntBASIC13.63□□□□□ -0.23
CSNK1A1P48729 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.63□□□□□ -0.23
CSNK1A1P48729 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSNK1A1P48729 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSNK1A1P48729 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CSNK1A1P48729 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.63□□□□□ -0.23
CSNK1A1P48729 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSNK1A1P48729 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSNK1A1P48729 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.63□□□□□ -0.23
CSNK1A1P48729 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CSNK1A1P48729 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSNK1A1P48729 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSNK1A1P48729 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSNK1A1P48729 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.63□□□□□ -0.23
CSNK1A1P48729 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CSNK1A1P48729 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSNK1A1P48729 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSNK1A1P48729 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.63□□□□□ -0.23
CSNK1A1P48729 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.63□□□□□ -0.23
CSNK1A1P48729 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSNK1A1P48729 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSNK1A1P48729 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.63□□□□□ -0.23
CSNK1A1P48729 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CSNK1A1P48729 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CSNK1A1P48729 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.62□□□□□ -0.23
CSNK1A1P48729 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.62□□□□□ -0.23
CSNK1A1P48729 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1A1P48729 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1A1P48729 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1A1P48729 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CSNK1A1P48729 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1A1P48729 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.62□□□□□ -0.23
CSNK1A1P48729 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1A1P48729 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1A1P48729 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1A1P48729 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.62□□□□□ -0.23
CSNK1A1P48729 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1A1P48729 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1A1P48729 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1A1P48729 MIR661-201ENST00000384842 89 ntBASIC13.62□□□□□ -0.23
CSNK1A1P48729 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1A1P48729 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1A1P48729 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.62□□□□□ -0.23
CSNK1A1P48729 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CSNK1A1P48729 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.62□□□□□ -0.23
CSNK1A1P48729 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.62□□□□□ -0.23
CSNK1A1P48729 TERF1P3-201ENST00000505638 1227 ntBASIC13.62□□□□□ -0.23
CSNK1A1P48729 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.62□□□□□ -0.23
CSNK1A1P48729 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.62□□□□□ -0.23
CSNK1A1P48729 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.62□□□□□ -0.23
CSNK1A1P48729 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.62□□□□□ -0.23
CSNK1A1P48729 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CSNK1A1P48729 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.62□□□□□ -0.23
CSNK1A1P48729 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.62□□□□□ -0.23
CSNK1A1P48729 AC093813.1-201ENST00000605066 256 ntBASIC13.62□□□□□ -0.23
CSNK1A1P48729 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.62□□□□□ -0.23
CSNK1A1P48729 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.62□□□□□ -0.23
CSNK1A1P48729 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1A1P48729 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1A1P48729 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1A1P48729 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.62□□□□□ -0.23
CSNK1A1P48729 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1A1P48729 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSNK1A1P48729 AL138799.1-201ENST00000448213 1675 ntBASIC13.62□□□□□ -0.23
CSNK1A1P48729 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.62□□□□□ -0.23
CSNK1A1P48729 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms