Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 OR2K2-202ENST00000374428 1038 ntBASIC15.01□□□□□ -0.01
CXCL12P48061 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CXCL12P48061 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCL12P48061 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.01□□□□□ -0.01
CXCL12P48061 AC078875.1-201ENST00000431907 724 ntBASIC15.01□□□□□ -0.01
CXCL12P48061 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CXCL12P48061 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.01□□□□□ -0.01
CXCL12P48061 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.01□□□□□ -0.01
CXCL12P48061 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
CXCL12P48061 AC005962.1-201ENST00000584100 773 ntBASIC15.01□□□□□ -0.01
CXCL12P48061 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCL12P48061 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.01□□□□□ -0.01
CXCL12P48061 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC15.01□□□□□ -0.01
CXCL12P48061 MIR6842-201ENST00000612539 65 ntBASIC15.01□□□□□ -0.01
CXCL12P48061 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CXCL12P48061 AC242376.2-201ENST00000619355 883 ntBASIC15.01□□□□□ -0.01
CXCL12P48061 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCL12P48061 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCL12P48061 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCL12P48061 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CXCL12P48061 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
CXCL12P48061 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CXCL12P48061 AL137783.1-201ENST00000623494 1896 ntBASIC15.01□□□□□ -0.01
CXCL12P48061 MST1L-201ENST00000442552 2185 ntBASIC15.01□□□□□ -0.01
CXCL12P48061 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCL12P48061 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCL12P48061 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCL12P48061 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.01□□□□□ -0.01
CXCL12P48061 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.01□□□□□ -0.01
CXCL12P48061 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CXCL12P48061 AC005332.8-201ENST00000622750 2735 ntBASIC15.01□□□□□ -0.01
CXCL12P48061 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CXCL12P48061 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15□□□□□ -0.01
CXCL12P48061 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15□□□□□ -0.01
CXCL12P48061 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CXCL12P48061 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CXCL12P48061 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15□□□□□ -0.01
CXCL12P48061 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CXCL12P48061 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15□□□□□ -0.01
CXCL12P48061 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CXCL12P48061 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15□□□□□ -0.01
CXCL12P48061 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
CXCL12P48061 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CXCL12P48061 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CXCL12P48061 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CXCL12P48061 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC15□□□□□ -0.01
CXCL12P48061 RPL8P2-201ENST00000430538 502 ntBASIC15□□□□□ -0.01
CXCL12P48061 RPL13AP19-201ENST00000434320 584 ntBASIC15□□□□□ -0.01
CXCL12P48061 BUD31-205ENST00000456893 512 ntTSL 5 BASIC15□□□□□ -0.01
CXCL12P48061 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15□□□□□ -0.01
CXCL12P48061 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15□□□□□ -0.01
CXCL12P48061 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
CXCL12P48061 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15□□□□□ -0.01
CXCL12P48061 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15□□□□□ -0.01
CXCL12P48061 GMFG-209ENST00000600322 622 ntTSL 5 BASIC15□□□□□ -0.01
CXCL12P48061 MIR6769A-201ENST00000617340 73 ntBASIC15□□□□□ -0.01
CXCL12P48061 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CXCL12P48061 AC112504.1-201ENST00000623415 1841 ntBASIC15□□□□□ -0.01
CXCL12P48061 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CXCL12P48061 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15□□□□□ -0.01
CXCL12P48061 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CXCL12P48061 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CXCL12P48061 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15□□□□□ -0.01
CXCL12P48061 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CXCL12P48061 AC025271.4-201ENST00000621477 1726 ntBASIC15□□□□□ -0.01
CXCL12P48061 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CXCL12P48061 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15□□□□□ -0.01
CXCL12P48061 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15□□□□□ -0.01
CXCL12P48061 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CXCL12P48061 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CXCL12P48061 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15□□□□□ -0.01
CXCL12P48061 AC136759.1-202ENST00000530858 2194 ntBASIC15□□□□□ -0.01
CXCL12P48061 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
CXCL12P48061 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
CXCL12P48061 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL12P48061 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL12P48061 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.99□□□□□ -0.01
CXCL12P48061 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL12P48061 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL12P48061 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL12P48061 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL12P48061 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL12P48061 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL12P48061 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.99□□□□□ -0.01
CXCL12P48061 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL12P48061 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.99□□□□□ -0.01
CXCL12P48061 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL12P48061 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL12P48061 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL12P48061 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL12P48061 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.99□□□□□ -0.01
CXCL12P48061 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.99□□□□□ -0.01
CXCL12P48061 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.99□□□□□ -0.01
CXCL12P48061 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CXCL12P48061 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CXCL12P48061 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CXCL12P48061 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC14.99□□□□□ -0.01
CXCL12P48061 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC14.99□□□□□ -0.01
CXCL12P48061 AL109837.1-201ENST00000603272 613 ntBASIC14.99□□□□□ -0.01
CXCL12P48061 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms