Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC19.56■□□□□ 0.72
COL5A2P05997 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC19.56■□□□□ 0.72
COL5A2P05997 REEP5-205ENST00000504247 480 ntTSL 5 BASIC19.56■□□□□ 0.72
COL5A2P05997 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC19.56■□□□□ 0.72
COL5A2P05997 AC003686.1-201ENST00000550956 1034 ntBASIC19.56■□□□□ 0.72
COL5A2P05997 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC19.56■□□□□ 0.72
COL5A2P05997 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC19.56■□□□□ 0.72
COL5A2P05997 MT3-203ENST00000565838 421 ntTSL 3 BASIC19.56■□□□□ 0.72
COL5A2P05997 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC19.56■□□□□ 0.72
COL5A2P05997 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
COL5A2P05997 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC19.56■□□□□ 0.72
COL5A2P05997 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL5A2P05997 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL5A2P05997 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC19.56■□□□□ 0.72
COL5A2P05997 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL5A2P05997 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL5A2P05997 KRT8P28-201ENST00000433288 1390 ntBASIC19.56■□□□□ 0.72
COL5A2P05997 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL5A2P05997 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL5A2P05997 HLA-DQB1-202ENST00000399079 1501 ntBASIC19.56■□□□□ 0.72
COL5A2P05997 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
COL5A2P05997 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL5A2P05997 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.55■□□□□ 0.72
COL5A2P05997 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL5A2P05997 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL5A2P05997 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.55■□□□□ 0.72
COL5A2P05997 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL5A2P05997 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
COL5A2P05997 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL5A2P05997 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL5A2P05997 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL5A2P05997 MIR3180-2-201ENST00000581748 88 ntBASIC19.55■□□□□ 0.72
COL5A2P05997 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC19.55■□□□□ 0.72
COL5A2P05997 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL5A2P05997 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL5A2P05997 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL5A2P05997 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.55■□□□□ 0.72
COL5A2P05997 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL5A2P05997 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
COL5A2P05997 MARK2P16-201ENST00000605714 1723 ntBASIC19.55■□□□□ 0.72
COL5A2P05997 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
COL5A2P05997 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.55■□□□□ 0.72
COL5A2P05997 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
COL5A2P05997 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
COL5A2P05997 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC19.55■□□□□ 0.72
COL5A2P05997 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL5A2P05997 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC19.55■□□□□ 0.72
COL5A2P05997 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
COL5A2P05997 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL5A2P05997 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL5A2P05997 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
COL5A2P05997 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL5A2P05997 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL5A2P05997 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC19.54■□□□□ 0.72
COL5A2P05997 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC19.54■□□□□ 0.72
COL5A2P05997 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC19.54■□□□□ 0.72
COL5A2P05997 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC19.54■□□□□ 0.72
COL5A2P05997 AC004837.1-201ENST00000446267 564 ntBASIC19.54■□□□□ 0.72
COL5A2P05997 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC19.54■□□□□ 0.72
COL5A2P05997 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL5A2P05997 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL5A2P05997 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC19.54■□□□□ 0.72
COL5A2P05997 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC19.54■□□□□ 0.72
COL5A2P05997 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL5A2P05997 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC19.54■□□□□ 0.72
COL5A2P05997 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
COL5A2P05997 AC138466.5-201ENST00000624002 808 ntBASIC19.54■□□□□ 0.72
COL5A2P05997 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL5A2P05997 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL5A2P05997 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL5A2P05997 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL5A2P05997 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL5A2P05997 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL5A2P05997 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL5A2P05997 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL5A2P05997 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.54■□□□□ 0.72
COL5A2P05997 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL5A2P05997 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL5A2P05997 LINC01815-202ENST00000641468 1409 ntBASIC19.54■□□□□ 0.72
COL5A2P05997 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
COL5A2P05997 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL5A2P05997 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC19.54■□□□□ 0.72
COL5A2P05997 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC19.54■□□□□ 0.72
COL5A2P05997 HNRNPA1P27-201ENST00000412087 955 ntBASIC19.54■□□□□ 0.72
COL5A2P05997 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC19.54■□□□□ 0.72
COL5A2P05997 LINC00634-202ENST00000505157 222 ntBASIC19.54■□□□□ 0.72
COL5A2P05997 NSD1-211ENST00000511258 809 ntTSL 3 BASIC19.54■□□□□ 0.72
COL5A2P05997 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC19.54■□□□□ 0.72
COL5A2P05997 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC19.54■□□□□ 0.72
COL5A2P05997 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC19.54■□□□□ 0.72
COL5A2P05997 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL5A2P05997 C2orf69P1-201ENST00000563532 1093 ntBASIC19.54■□□□□ 0.72
COL5A2P05997 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC19.54■□□□□ 0.72
COL5A2P05997 FO393412.1-201ENST00000619841 382 ntBASIC19.54■□□□□ 0.72
COL5A2P05997 AC009145.4-201ENST00000625119 1294 ntBASIC19.54■□□□□ 0.72
COL5A2P05997 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL5A2P05997 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL5A2P05997 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL5A2P05997 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC19.53■□□□□ 0.72
COL5A2P05997 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms