Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GGPS1O95749 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
GGPS1O95749 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
GGPS1O95749 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GGPS1O95749 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GGPS1O95749 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GGPS1O95749 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GGPS1O95749 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GGPS1O95749 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GGPS1O95749 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GGPS1O95749 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
GGPS1O95749 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.08■□□□□ 0.32
GGPS1O95749 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GGPS1O95749 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.08■□□□□ 0.32
GGPS1O95749 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.08■□□□□ 0.32
GGPS1O95749 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
GGPS1O95749 AC103810.3-201ENST00000583567 96 ntBASIC17.08■□□□□ 0.32
GGPS1O95749 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
GGPS1O95749 AC004466.1-201ENST00000599515 1080 ntBASIC17.08■□□□□ 0.32
GGPS1O95749 AL022328.3-201ENST00000607943 679 ntBASIC17.08■□□□□ 0.32
GGPS1O95749 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.08■□□□□ 0.32
GGPS1O95749 AL603764.1-201ENST00000636452 321 ntBASIC17.08■□□□□ 0.32
GGPS1O95749 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GGPS1O95749 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
GGPS1O95749 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GGPS1O95749 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GGPS1O95749 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.08■□□□□ 0.32
GGPS1O95749 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
GGPS1O95749 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GGPS1O95749 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GGPS1O95749 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GGPS1O95749 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.08■□□□□ 0.32
GGPS1O95749 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.08■□□□□ 0.32
GGPS1O95749 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
GGPS1O95749 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GGPS1O95749 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GGPS1O95749 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
GGPS1O95749 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GGPS1O95749 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.07■□□□□ 0.32
GGPS1O95749 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
GGPS1O95749 AL023775.1-201ENST00000454907 1746 ntBASIC17.07■□□□□ 0.32
GGPS1O95749 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.07■□□□□ 0.32
GGPS1O95749 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
GGPS1O95749 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
GGPS1O95749 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GGPS1O95749 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
GGPS1O95749 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
GGPS1O95749 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.07■□□□□ 0.32
GGPS1O95749 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GGPS1O95749 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GGPS1O95749 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GGPS1O95749 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GGPS1O95749 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.07■□□□□ 0.32
GGPS1O95749 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.07■□□□□ 0.32
GGPS1O95749 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.07■□□□□ 0.32
GGPS1O95749 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
GGPS1O95749 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
GGPS1O95749 AP003171.2-201ENST00000528208 925 ntBASIC17.07■□□□□ 0.32
GGPS1O95749 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.07■□□□□ 0.32
GGPS1O95749 DUX4L47-201ENST00000566374 394 ntBASIC17.07■□□□□ 0.32
GGPS1O95749 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.07■□□□□ 0.32
GGPS1O95749 AC104982.3-201ENST00000581995 514 ntBASIC17.07■□□□□ 0.32
GGPS1O95749 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.07■□□□□ 0.32
GGPS1O95749 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GGPS1O95749 AL096828.3-201ENST00000615354 462 ntBASIC17.07■□□□□ 0.32
GGPS1O95749 AL008638.5-201ENST00000623814 1298 ntBASIC17.07■□□□□ 0.32
GGPS1O95749 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.07■□□□□ 0.32
GGPS1O95749 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.07■□□□□ 0.32
GGPS1O95749 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GGPS1O95749 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GGPS1O95749 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.07■□□□□ 0.32
GGPS1O95749 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GGPS1O95749 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GGPS1O95749 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GGPS1O95749 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
GGPS1O95749 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GGPS1O95749 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GGPS1O95749 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
GGPS1O95749 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GGPS1O95749 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GGPS1O95749 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
GGPS1O95749 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
GGPS1O95749 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GGPS1O95749 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.06■□□□□ 0.32
GGPS1O95749 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.06■□□□□ 0.32
GGPS1O95749 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GGPS1O95749 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GGPS1O95749 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GGPS1O95749 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GGPS1O95749 AL360270.3-201ENST00000609118 1348 ntBASIC17.06■□□□□ 0.32
GGPS1O95749 HYMAI-201ENST00000635591 3347 ntBASIC17.06■□□□□ 0.32
GGPS1O95749 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.06■□□□□ 0.32
GGPS1O95749 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
GGPS1O95749 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GGPS1O95749 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.06■□□□□ 0.32
GGPS1O95749 GHSR-202ENST00000427970 912 ntBASIC17.06■□□□□ 0.32
GGPS1O95749 AL391280.1-201ENST00000506969 1062 ntBASIC17.06■□□□□ 0.32
GGPS1O95749 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
GGPS1O95749 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.06■□□□□ 0.32
GGPS1O95749 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms