Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP2Q96SN8 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDK5RAP2Q96SN8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDK5RAP2Q96SN8 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
CDK5RAP2Q96SN8 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.58■□□□□ 0.41
CDK5RAP2Q96SN8 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.58■□□□□ 0.41
CDK5RAP2Q96SN8 AC006122.1-201ENST00000493323 440 ntBASIC17.58■□□□□ 0.41
CDK5RAP2Q96SN8 AC245884.6-201ENST00000515672 1067 ntBASIC17.58■□□□□ 0.41
CDK5RAP2Q96SN8 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.58■□□□□ 0.41
CDK5RAP2Q96SN8 AC008805.1-201ENST00000590892 364 ntBASIC17.58■□□□□ 0.41
CDK5RAP2Q96SN8 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.58■□□□□ 0.41
CDK5RAP2Q96SN8 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.41
CDK5RAP2Q96SN8 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDK5RAP2Q96SN8 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDK5RAP2Q96SN8 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.58■□□□□ 0.41
CDK5RAP2Q96SN8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDK5RAP2Q96SN8 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CDK5RAP2Q96SN8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CDK5RAP2Q96SN8 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CDK5RAP2Q96SN8 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CDK5RAP2Q96SN8 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.58■□□□□ 0.41
CDK5RAP2Q96SN8 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.58■□□□□ 0.41
CDK5RAP2Q96SN8 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CDK5RAP2Q96SN8 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDK5RAP2Q96SN8 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDK5RAP2Q96SN8 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.58■□□□□ 0.41
CDK5RAP2Q96SN8 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 KRT8P29-201ENST00000420409 1371 ntBASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 ST13P19-201ENST00000442505 1124 ntBASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 YRDCP1-201ENST00000621419 643 ntBASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 AL805961.1-203ENST00000641078 1258 ntBASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDK5RAP2Q96SN8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 AC126177.1-201ENST00000547829 2218 ntBASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDK5RAP2Q96SN8 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms