Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 AL121723.1-201ENST00000445194 1519 ntBASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 INTS4P2-202ENST00000614726 2019 ntBASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 RAB43P1-201ENST00000561790 589 ntBASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 AC010319.3-201ENST00000597028 470 ntBASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 AL049840.4-201ENST00000602422 811 ntBASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.21■□□□□ 0.03
SH3KBP1Q96B97 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SH3KBP1Q96B97 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.02
SH3KBP1Q96B97 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SH3KBP1Q96B97 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
SH3KBP1Q96B97 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.21■□□□□ 0.02
SH3KBP1Q96B97 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 AC087481.3-201ENST00000602886 1894 ntBASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 AC067750.1-201ENST00000608826 6545 ntBASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 ARSEP1-201ENST00000420443 635 ntBASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 KRT43P-201ENST00000434019 910 ntBASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 IGHV3-71-201ENST00000523324 359 ntBASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 KRT17P8-201ENST00000540749 863 ntBASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 AC017083.2-201ENST00000608069 979 ntBASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.2■□□□□ 0.02
SH3KBP1Q96B97 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms