Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
USP45Q70EL2 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP45Q70EL2 AL360270.3-201ENST00000609118 1348 ntBASIC15.33■□□□□ 0.04
USP45Q70EL2 AC013268.4-201ENST00000637413 2228 ntBASIC15.33■□□□□ 0.04
USP45Q70EL2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
USP45Q70EL2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP45Q70EL2 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP45Q70EL2 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.33■□□□□ 0.04
USP45Q70EL2 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.33■□□□□ 0.04
USP45Q70EL2 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.33■□□□□ 0.04
USP45Q70EL2 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
USP45Q70EL2 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.33■□□□□ 0.04
USP45Q70EL2 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
USP45Q70EL2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP45Q70EL2 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
USP45Q70EL2 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP45Q70EL2 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.33■□□□□ 0.04
USP45Q70EL2 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP45Q70EL2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP45Q70EL2 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
USP45Q70EL2 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP45Q70EL2 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP45Q70EL2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
USP45Q70EL2 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP45Q70EL2 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.32■□□□□ 0.04
USP45Q70EL2 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
USP45Q70EL2 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP45Q70EL2 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
USP45Q70EL2 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.32■□□□□ 0.04
USP45Q70EL2 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
USP45Q70EL2 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP45Q70EL2 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP45Q70EL2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP45Q70EL2 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
USP45Q70EL2 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.32■□□□□ 0.04
USP45Q70EL2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP45Q70EL2 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.32■□□□□ 0.04
USP45Q70EL2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.32■□□□□ 0.04
USP45Q70EL2 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.32■□□□□ 0.04
USP45Q70EL2 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.32■□□□□ 0.04
USP45Q70EL2 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
USP45Q70EL2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.32■□□□□ 0.04
USP45Q70EL2 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.32■□□□□ 0.04
USP45Q70EL2 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.32■□□□□ 0.04
USP45Q70EL2 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.32■□□□□ 0.04
USP45Q70EL2 AP001889.1-201ENST00000525414 633 ntBASIC15.32■□□□□ 0.04
USP45Q70EL2 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
USP45Q70EL2 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.32■□□□□ 0.04
USP45Q70EL2 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.32■□□□□ 0.04
USP45Q70EL2 AC106886.1-201ENST00000568660 600 ntBASIC15.32■□□□□ 0.04
USP45Q70EL2 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.32■□□□□ 0.04
USP45Q70EL2 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.32■□□□□ 0.04
USP45Q70EL2 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.32■□□□□ 0.04
USP45Q70EL2 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.32■□□□□ 0.04
USP45Q70EL2 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
USP45Q70EL2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
USP45Q70EL2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
USP45Q70EL2 AC018665.1-201ENST00000622927 1362 ntBASIC15.32■□□□□ 0.04
USP45Q70EL2 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
USP45Q70EL2 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
USP45Q70EL2 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.32■□□□□ 0.04
USP45Q70EL2 AC126177.1-201ENST00000547829 2218 ntBASIC15.32■□□□□ 0.04
USP45Q70EL2 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
USP45Q70EL2 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
USP45Q70EL2 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.32■□□□□ 0.04
USP45Q70EL2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
USP45Q70EL2 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP45Q70EL2 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.32■□□□□ 0.04
USP45Q70EL2 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP45Q70EL2 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
USP45Q70EL2 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
USP45Q70EL2 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP45Q70EL2 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP45Q70EL2 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.31■□□□□ 0.04
USP45Q70EL2 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.31■□□□□ 0.04
USP45Q70EL2 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
USP45Q70EL2 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP45Q70EL2 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.31■□□□□ 0.04
USP45Q70EL2 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP45Q70EL2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP45Q70EL2 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP45Q70EL2 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
USP45Q70EL2 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP45Q70EL2 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.31■□□□□ 0.04
USP45Q70EL2 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP45Q70EL2 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
USP45Q70EL2 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
USP45Q70EL2 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
USP45Q70EL2 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.31■□□□□ 0.04
USP45Q70EL2 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.31■□□□□ 0.04
USP45Q70EL2 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP45Q70EL2 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.31■□□□□ 0.04
USP45Q70EL2 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.31■□□□□ 0.04
USP45Q70EL2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.31■□□□□ 0.04
USP45Q70EL2 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.31■□□□□ 0.04
USP45Q70EL2 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
USP45Q70EL2 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP45Q70EL2 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.31■□□□□ 0.04
USP45Q70EL2 AL162274.1-201ENST00000617191 1098 ntBASIC15.31■□□□□ 0.04
USP45Q70EL2 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms